Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0994 ATGTTCCCTTCTTCTTCACTCACTCTGTTTTCTAGAAGCAGAGCCACCATGTCCATGCTTCTACTTCTTCCTGTGTCTCTTATCGTCTTCTTCCTCTTCCCTCTTCCATTTTCTGTCTCTCTGAACCAGGAGGGTCTCTACCTCTACCAGTTCAAGCTCTCTCTGGACGACCCCGACTCCGCCCTCTCGTCCTGGAACGACCGTGACGTCACCCCTTGTGCCTGGTTGGGTGTCACCTGCGACGCATCCAACACCTCCGTCACACACCTCGACCTCTCTAGCACCAACATCGCAGGCCCATTCTCTGCCTCCATCCTCTGTCGCCTCCCCAGCCTCTCCTCCATCTCCCTCTTCAACAACTCCATCAACCATACTCTGCCTCTCGAAGTCTTCTCTTGTCGCTCCCTCGTCCACCTCGACCTTTCTCAGAACCTCCTTACCGGTGCGCTCCCCCACACACTATCCCTCCTCCCCAATCTCAGATACCTCGACTTGACGGGGAACAACTTCTCCGGTCCTATTCCTGATTCCTTCGGAGGCTTCCAGAAGCTCGAGGTCATTTCTCTTGTGTACAATCTTCTAGAAGGGACCATTCCCGCTTCTCTGGGTAATATTACGACTTTGAAGATGCTCAATCTTTCATACAACCCGTTTTATCCGGGTCGGATCCCTCCGGAGATCGGGAACCTCACGAATCTCGAGGTGCTCTGGTTGACGCAATGTAACTTGGTGGGCACGATTCCTGACTCGCTTGGGAGGTTGAAGAAGCTCAAGGATTTGGACCTGGCGTTAAATAATTTGTACGGGTCGATCCCGAGCTCGCTTATGGAGTTGACGAGTTTGAACCAGATTGAGCTGTATAATAACTCGTTGTCCGGCGAGTTGCCTCCGGGATGGTCGAACCTTACTACATTGAGGCTGCTCGACGCGTCGATGAACCACTTGACGGGGACGATTCCGGACGAGTTGTGTCGGTTGCCGCTAGAAAGCCTCAATCTCTACGAGAATCGTTTCGAGGGTGAGTTGCCGGAGAGCATAGCGATCTCTCCGAATCTCTATGAGCTGAGATTGTTCGGGAACAGACTCACTGGCAAGCTTCCGGCGAGTCTCGGGAAAAATTCGCCTCTACGGTGGCTTGATGTGTCGAGCAACCAGTTCTGGGGAGAAATTCCGGGGAGTCTGTGTGACCATGGGGCGTTGGAGGAGCTTCTGATGATATATAATTTGTTTTCCGGCGAGATCCCGGCGGGTTTGGGGATGTGCCAGAGCTTGACACGTGTCAGGCTCGGTTTCAACCGGTTGTCCGGCGAAGTTCCGGCGGGTATATGGGGGCTTCCCCATGTATATCTGCTCGAGCTTGTTGATAACTCGTTCTCGGGTTCAATTTCTAAAACTATTGCCGGGGCTGGGAATCTGTCGTTATTGATTATATCGAAGAACAATTTCAGTGCAGCGATCCCAGATGAGATTGGATGGTTGGAAAATCTTGAGGAATTTTCTGGGAGTGATAACAAGTTTAGTGGGTCACTACCTGATAGTATTGTGAATCTTGGGCAGCTTGGGACTCTTGATCTTCACAACAATAAACTCTCTGGCGAGCTTCCGAAGGGAATTCGATCTTGGAGGAAACTCAATGAGTTGAATTTGGGGAACAATGAGATCAGTGGGAAAATTCCTGATGAAATTGGGAGTTTGTCCGTGCTTAATTTCCTTGACTTTTCCCGCAATCAACTTTCGGGGAAAATTCCTCGGGGGTTGCAAAATTTGAAGCTCAATCAACTGAATTTGTCGTACAATCGACTTTCCGGAGAACTTCCCCCTCTGTTAGCAAAGGAAATGTACAGGACTAGCTTTCTGGGCAATCCTGGTTTATGTGGGGATTTGAAAGGTCTATGTGATCGCAGAGGTGACGATAAAAGTGCAGGTTATGTTTGGCTGCTTCGAGCTATTTTCATTGTTGCCACTCTGGTGTTTCTCATTGGTGTGGTCTGGTTCTATTTCAAGTATAGGAACTTCAAGAATGCAAGAAGAGCTATTGATAAATCGAAATGGACTTTAATGTCGTTCCATAAACTGGGTTTCAGCGAAGACGAGATTCTGAACTGCCTTGATGATGATAATGTGATTGGTAGTGGATCATCCGGGAAAGTTTACAAGGTTGTACTCAGCAATGGAGAGGCAGTTGCTGTGAAGAAACTATGGGGAGGACTCACGAAGGACGTAGAGAGTGGCGATCTTGAAAAGGGTCGAGTTCAAGACAATGCTTTCGATGCAGAGGTTGAGACTCTGGGCAAAATTAGGCACAAGAACATTGTGAAACTATGGTGTTGCTGCACCACCAGGGACTGCAAGCTCTTGGTGTATGAGTACATGCCCAATGGTAGTCTTGGAGATTTGCTGCATAGCAGTAAAGGAGGGTTGTTGGATTGGCCTACGAGGTACAAGATAGCAGTTGATGCTGCAGAAGGCCTCTCTTATCTGCATCATGACTGTGTTCCTCCAATTGTTCATAGAGATGTGAAATCCAACAACATCTTGTTGGATGGGGACTTCGGTGCGAGGGTGGCCGATTTTGGAGTAGCTAAGGTGGTCGAAACCACCGCGAAGGGAGCTAAATCCATGTCTGTTATAGCCGGGTCATGTGGGTACATTGCACCAGAATATGCATACACGCTAAGAGTGAATGAGAAGAGCGACATATACAGTTTTGGTGTGGTCATACTCGAGTTGGTCACCGGAAGACGCCCGGTGGACCCGGAATTTGGGGAAAAAGACTTGGTGAAGTGGGTCTGCACCACCTTAGATCAGAAGGGTGTGGATCATGTGGTTGACTCCAGACTTGATTCCTGTTTCAAAGAAGAAATTTGCAAGGTCCTCAACATCGGCCTCATGTGCACCAGCCCTCTTCCAATCAACCGCCCCGCCATGAGAAGGGTGGTGAAGATGTTACAAGAAGTAGGCTCAGACAACAGCCAAACGAAGCCTGCAAAGAAAGATGGCAAGTTGTCACCTTATTACTATGATGATGGCTCTGATCATGGAAGCGTAGCGTAG 3054 0.4902 MFPSSSLTLFSRSRATMSMLLLLPVSLIVFFLFPLPFSVSLNQEGLYLYQFKLSLDDPDSALSSWNDRDVTPCAWLGVTCDASNTSVTHLDLSSTNIAGPFSASILCRLPSLSSISLFNNSINHTLPLEVFSCRSLVHLDLSQNLLTGALPHTLSLLPNLRYLDLTGNNFSGPIPDSFGGFQKLEVISLVYNLLEGTIPASLGNITTLKMLNLSYNPFYPGRIPPEIGNLTNLEVLWLTQCNLVGTIPDSLGRLKKLKDLDLALNNLYGSIPSSLMELTSLNQIELYNNSLSGELPPGWSNLTTLRLLDASMNHLTGTIPDELCRLPLESLNLYENRFEGELPESIAISPNLYELRLFGNRLTGKLPASLGKNSPLRWLDVSSNQFWGEIPGSLCDHGALEELLMIYNLFSGEIPAGLGMCQSLTRVRLGFNRLSGEVPAGIWGLPHVYLLELVDNSFSGSISKTIAGAGNLSLLIISKNNFSAAIPDEIGWLENLEEFSGSDNKFSGSLPDSIVNLGQLGTLDLHNNKLSGELPKGIRSWRKLNELNLGNNEISGKIPDEIGSLSVLNFLDFSRNQLSGKIPRGLQNLKLNQLNLSYNRLSGELPPLLAKEMYRTSFLGNPGLCGDLKGLCDRRGDDKSAGYVWLLRAIFIVATLVFLIGVVWFYFKYRNFKNARRAIDKSKWTLMSFHKLGFSEDEILNCLDDDNVIGSGSSGKVYKVVLSNGEAVAVKKLWGGLTKDVESGDLEKGRVQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARVADFGVAKVVETTAKGAKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRRPVDPEFGEKDLVKWVCTTLDQKGVDHVVDSRLDSCFKEEICKVLNIGLMCTSPLPINRPAMRRVVKMLQEVGSDNSQTKPAKKDGKLSPYYYDDGSDHGSVA 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0994 1017 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 653 986 - -
Dere10g0994 1017 Pfam Leucine rich repeat 127 170 IPR001611 GO:0005515
Dere10g0994 1017 Gene3D Ribonuclease Inhibitor 328 634 IPR032675 -
Dere10g0994 1017 Gene3D Transferase(Phosphotransferase) domain 1 791 1007 - -
Dere10g0994 1017 Gene3D Ribonuclease Inhibitor 198 326 IPR032675 -
Dere10g0994 1017 ProSiteProfiles Protein kinase domain profile. 703 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0994 1017 FunFam Receptor-like protein kinase HSL1 325 634 - -
Dere10g0994 1017 SUPERFAMILY RNI-like 89 435 - -
Dere10g0994 1017 FunFam Leucine-rich receptor-like protein kinase family protein 223 321 - -
Dere10g0994 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Dere10g0994 1017 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 791 1000 - -
Dere10g0994 1017 SUPERFAMILY RNI-like 376 606 - -
Dere10g0994 1017 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
Dere10g0994 1017 Gene3D Ribonuclease Inhibitor 41 197 IPR032675 -
Dere10g0994 1017 Pfam Leucine Rich repeat 83 98 IPR001611 GO:0005515
Dere10g0994 1017 ProSitePatterns Protein kinases ATP-binding region signature. 709 732 IPR017441 GO:0005524
Dere10g0994 1017 SUPERFAMILY Protein kinase-like (PK-like) 698 984 IPR011009 -
Dere10g0994 1017 SMART serkin_6 703 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0994 1017 Gene3D Phosphorylase Kinase; domain 1 687 790 - -
Dere10g0994 1017 Pfam Protein kinase domain 706 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0994 1017 SMART LRR_typ_2 302 326 IPR003591 -
Dere10g0994 1017 SMART LRR_typ_2 134 156 IPR003591 -
Dere10g0994 1017 SMART LRR_typ_2 565 588 IPR003591 -
Dere10g0994 1017 SMART LRR_typ_2 517 541 IPR003591 -
Dere10g0994 1017 SMART LRR_typ_2 278 301 IPR003591 -
Dere10g0994 1017 SMART LRR_typ_2 109 133 IPR003591 -
Dere10g0994 1017 SMART LRR_typ_2 230 254 IPR003591 -
Dere10g0994 1017 SMART LRR_typ_2 157 180 IPR003591 -
Dere10g0994 1017 MobiDBLite consensus disorder prediction 987 1017 - -
Dere10g0994 1017 FunFam Receptor-like protein kinase HSL1 687 790 - -
Dere10g0994 1017 MobiDBLite consensus disorder prediction 992 1006 - -
Dere10g0994 1017 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 41 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0994 Dere-ChrDere10 18627566 18631524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0994 36 1017 Receptor kinase-like Gene Family AT1G28440 72.267 0.0 1454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere10g0994 Pkinase 1.7e-41 CL0016