Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0964 ATGGTCGGAAGTCTTGAAGTCGGAGCCGTCCCTTTCAACCCAGACGGATGGGGCCCACCTGACGCTTCCACCACCGCTACTTCCACCACTACCAGCCTCCCAGTGAATGTACCCTATGCCCCATTCTCCCGCTCAGACAAACTGGGTCGGATCGCCGACTGGACCCGAAACTTCAACAACCCTACCCGACCCAAGAGCTCGGCCGACGCCGTATTCGACTTCACCAACGACGATTCCTTCCCTGCGTCGGCCGATGATGATTCCTCCTTTCGCTTGGTCGATGGAAAGCCCCCACCGCGACCCAAGTTTGGCCCCAAATGGCGGTTCCAGCAGCAACGGCAGCTCCCACAGCGCCGTGACGAGGAGGTGGAGGCCCGAAAACGTGAGGCCGAGAAGGAGAGGGCACGCCGTGATCGTCTCTACCATCTCAACAGATCCAACGCTAATGCTACTCGTCGTGAAGCCGCCGTCTTCAAGTCTTCTGTGGATATTCAGCCCGAGTGGAACATGTTGGACCAGATACCATTTTCAACTTTCTCGAAGCTCTCCTTCACTGTTCCAGAACCCGAAGACCTTCTTCTCTGTGGGGGGCTTGAGTATTATGACAGGTCGTATGATCGGATTACCCCGAAGAACGAACGTCGTCTTGAGAGGTTCAAGAATAGAAACTTTTTCAAGGTTACAACCACTGATGACCCAGTGATCCGAAGGCTTGCTAACGAGGATAAAGCGACGGTTTTTGCCACTGATACAATTCTTTCAACGCTCATGTGCGCACCCAGGTCTGTTTACTCCTGGGATATTGTTATTCAGCGAGTTGGGAACAAGCTGTTTTTCGATAAAAGGGATGGGTCGCAATTGGATTTGCTTTCTGTCCACGAGACCTCGCAGGAACCATTGCCTGAGGCTAAGGAAGATATTAACTCAGCACATTCATTGAGTGTCGAGGCAGCGTATATTAACCAGAATTTCTCGCAACAGGTTTTAATTAGAGATGGTAACAAGGTGACGTTCGATGAGCCTAATCCTTTTGCAAATGAGGGTGAAGAGGTTGCTTCTGTGGCATATAGGTATAGGAGGTGGAAGCTCGATGATGATATGTATCTTGTTGCAAGATGTGAAGTTCAGAGTGTTGTTGATGTGAACAAGCAGAGGTCCTTCCTTACTTTGAACGCATTAAATGAATTTGATCCCAAATATTCTGGTGTCGATTGGAGACAGAAGTTGGAGACACAGAGGGGTGCAGTCTTGGCTACAGAGCTTAAGAATAATGCAAATAAGTTGGCGAAATGGACTGCCCAAGCTCTGTTGGCAAGTGCAGATATGATGAAGTTGGGTTACGTTTCCCGGGTCCATCCCCGTGATCATTTTAATCATGTGATTTTGGCTGTAAATGGATATAAACCCCGGGACTTTGCAACTCAAATTAATTTGAACACAGCTAATATGTGGGGAATCGTGAAATCTATTGTGGACTTATGCATGAAATTGAATGAGGGTAAGTATGTTTTAGTCAAGGATCCTTCTAAGCCCCAGGTTAGGATCTATGAGGTTCCAGCTGATGCATTTGAGAATGACTACGTGGAGGAGCCACTGCCTGAGGAGGAACAAGTTCAACCACCAACAGAGGGTGGCGATGGTGGGGAGGCAACTGCTACAACAAATGATGTGGAAGATAAGAAGATTGATGATCAAGCTTAA 1701 0.4856 MVGSLEVGAVPFNPDGWGPPDASTTATSTTTSLPVNVPYAPFSRSDKLGRIADWTRNFNNPTRPKSSADAVFDFTNDDSFPASADDDSSFRLVDGKPPPRPKFGPKWRFQQQRQLPQRRDEEVEARKREAEKERARRDRLYHLNRSNANATRREAAVFKSSVDIQPEWNMLDQIPFSTFSKLSFTVPEPEDLLLCGGLEYYDRSYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKEDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVNGYKPRDFATQINLNTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEEEQVQPPTEGGDGGEATATTNDVEDKKIDDQA 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0964 566 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 9 517 IPR007783 GO:0003743|GO:0005737|GO:0005852
Dere10g0964 566 MobiDBLite consensus disorder prediction 113 135 - -
Dere10g0964 566 MobiDBLite consensus disorder prediction 1 42 - -
Dere10g0964 566 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 529 IPR007783 GO:0003743|GO:0005737|GO:0005852
Dere10g0964 566 MobiDBLite consensus disorder prediction 83 135 - -
Dere10g0964 566 MobiDBLite consensus disorder prediction 20 38 - -
Dere10g0964 566 Coils Coil 118 138 - -
Dere10g0964 566 MobiDBLite consensus disorder prediction 528 566 - -
Dere10g0964 566 PIRSF Transl_init_eIF3d 1 547 IPR007783 GO:0003743|GO:0005737|GO:0005852
Dere10g0964 566 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 4 540 IPR007783 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0964 Dere-ChrDere10 18056604 18058304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0964 4 564 Eukaryotic Initiation Factors Gene Family AT4G20980 79.145 0.0 930