Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0963 ATGGAGAAAAACCCTAGTTCCTCCAGAACTGACAGAAAATTCATCGAGAGGAATAGAAGAAATCAGATGAAGGCTCTCTACTCCAAACTCTACTCGCTTGTGCCTCATCAAAGTCCAAGGGAGGCCATTTCTCTACAGGACCAGCTAGAGGAAGCCACAAACTACATAAAGAAGTTACAGATGAACTTGGAGAAACTGAAGGAGAAGAAGGAAAACCTCAGTGGAATCGATCATCAGAGGCCAAATTTTCGCATACATCCAGGAATTAAGATTGAGAGGTTAAAATGTCCACGAGTGGAGATCCAAGAAGTGGGTCCTACAGCCTTACGGGTTGTTCTGAAAACTGAATCGAATACTGTGTATACCTTCAACGATATTATTCGAGAGCTTCATGAAGAAGGAGCAGAGATCGTTAATGCCAGTTACACAGTAGCCAAAGATGAAATTTTTCATACAATATATTGTGAGGTCGAAGAATCTGCCAATGTTGCTGCAGTGATATCCAAGAGATTAAAGAGATTTTAG 525 0.4114 MEKNPSSSRTDRKFIERNRRNQMKALYSKLYSLVPHQSPREAISLQDQLEEATNYIKKLQMNLEKLKEKKENLSGIDHQRPNFRIHPGIKIERLKCPRVEIQEVGPTALRVVLKTESNTVYTFNDIIRELHEEGAEIVNASYTVAKDEIFHTIYCEVEESANVAAVISKRLKRF 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0963 174 FunFam Transcription factor bHLH162 1 84 - -
Dere10g0963 174 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 7 59 IPR011598 GO:0046983
Dere10g0963 174 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 5 73 IPR036638 GO:0046983
Dere10g0963 174 Coils Coil 42 76 - -
Dere10g0963 174 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 8 172 - -
Dere10g0963 174 Gene3D - 1 83 IPR036638 GO:0046983
Dere10g0963 174 Pfam Helix-loop-helix DNA-binding domain 9 60 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0963 Dere-ChrDere10 18025238 18026573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0963 4 159 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 44.512 1.45e-37 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere10g0963 HLH 6.6e-08 No_clan