Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0962 ATGATCTCTCTATCCTACCCATATCTGCTTCTACTGTTTTTCACGTTCTTCGATTCATTTCTGGCCGTTGATTTTGTCTTCAACGGCTTCAACTCTTCCGATGTGTTGCTCTATGGCAACGCCACCATTGATTCTGGAATTCTAACTCTAACCCACCACCAAACTTTCTCGATTGGTCGTGCTCTGTACCCTCAAAAGATTAGAACAAAGAACCCCAATTCTTCCTATGTATACCCTTTCTCTACTTCTTTCATCTTCGCTATGGCACCTTATGAGGATACTCTTCCTGGGCATGGCGTGGTTTTCATCTTCACTCCTGTTCGAGGAATCCAAGGTACAAGCTCTGCTCAACATTTGGGCCTTTTTAACCTCACCAACAATGGGAATTCCAGCAACCATGTGTTCGGTGTTGAGTTCGATGTGTTCATGAATCAGGAGTTCGAAGACATAAACGCTAATCACGTCGGGATTTGCATGAACTCTCTCAAATCTGTTGCCTCATACGGTGCAGGGTACTGGCCGGACGACGGCAAGTCGTTTGAGGAATTGACGCTTAACGATGGTAAGAATTACCAAGTTTGGATTGACTATGAAGATTCTCTGATTAATGTCACTATGGCACCAGTGGGCACAAAACGGCCTCGTAGGCCATTGTTGAATGTGTCGCTCAACTTATCTGAGATTTTTGAAGAAGAAATGTATGTTGGGTTTACAAGTGCTACAGGGCAATTAGTTCAAAGTCACAAGGTTTTGGCTTGGAGCTTGAGTAATTCAAATTTTTCGTTAAGCGAAGCATTAATCACTTCTGGGTTGCCCTCTTTTGTTCTTCAAAAGGATTCAATCTTTCAATCCAAAGGGTTTATTGCAGGAATCACTATAGGCGTTTTCTTTGCTGTTTGTTTCATATTACTTTTATCACTGTTCTTGATTCAGAGGAAGCGAAGGAAAGCGAGGGAGAGAGAAGCAATGGAGGATTGGGAATTAGAGTATTGGCCACACAGAATAACCTATGACGAAATAGCAACAGCAACAAATGGATTCTGTGAGGAAAATGTGATTGGAATTGGTGGGAATGGTAAGGTATATAAGGGCGTTCTGGGAGGGGCAGAGATTGCTGTGAAGCGAATTTCGCATGAAAACAACGGATTGAGAGAATTTCTGGCAGAAATTTCAAGTTTAGGAAGATTGAAACATAGAAATTTGGTGGGGTTGAGAGGATGGTGTAAGAAAGACATGGGGAATTTCTTATTGGTCTATGATTACATGGAGAATGGGAGTCTAGACAAGAGAGTGTTTGAATGTGATGACAAAAGCAAGCCGCTAACCACTGAAGAAAGAATAAGAATTCTGAAAGATGTGGCTTCTGGGATCTTATACTTGCACGAAGGGTGGGAAGCCAAAGTTCTGCACAGAGATATCAAAGCCAGCAATGTACTACTAGATAAGGACCTTAATGGAAGGCTAGGAGATTTTGGATTGGCTCGTATGCACAACCATGGTCAAGTTGCTAGCACCACAAAAGTGGTTGGAACAGTGGGTTACATGGCCCCTGAAGTAATTAAGACTGGAAGAGCATCAACTCAGACAGATGTTTACATGTTTGGAATCTTGGTTTTAGAGGTCATGTGTGGAAGGAGACCTCTAGTGGAAGGTAAGCCATCTCTGGTGGAGTGGGTGTGGCAACTCATGGTACAAGGGCAACTAATAAATGCAGTTGATGAGTGGTTGAGGGCTCAAGGAGGAGTGAATGAGCAAGTGGAAAGAGTACTTCACTTGGGTTTGTTGTGTGCTTACCCTGATCCAAAAGCCAGGCTAACAATGAGACAAGCAGTGAAAATTTTAGAGGGAAAGAATGAGGATGGGGAGACTGAAAGTGAGGATATTAATACGTATTTGCTCCAACAGATGAACTCAAGGGATATATTTTCTGAATATTCTCATTATTTTAACTTTTCATCACACCCAACATTTGAAGATATACGGCACACTCATTCTTCCTCTACGTCTCTCACATGGTCCAACTCTGTAGTTGTGGGTAGGTAA 2043 0.4239 MISLSYPYLLLLFFTFFDSFLAVDFVFNGFNSSDVLLYGNATIDSGILTLTHHQTFSIGRALYPQKIRTKNPNSSYVYPFSTSFIFAMAPYEDTLPGHGVVFIFTPVRGIQGTSSAQHLGLFNLTNNGNSSNHVFGVEFDVFMNQEFEDINANHVGICMNSLKSVASYGAGYWPDDGKSFEELTLNDGKNYQVWIDYEDSLINVTMAPVGTKRPRRPLLNVSLNLSEIFEEEMYVGFTSATGQLVQSHKVLAWSLSNSNFSLSEALITSGLPSFVLQKDSIFQSKGFIAGITIGVFFAVCFILLLSLFLIQRKRRKAREREAMEDWELEYWPHRITYDEIATATNGFCEENVIGIGGNGKVYKGVLGGAEIAVKRISHENNGLREFLAEISSLGRLKHRNLVGLRGWCKKDMGNFLLVYDYMENGSLDKRVFECDDKSKPLTTEERIRILKDVASGILYLHEGWEAKVLHRDIKASNVLLDKDLNGRLGDFGLARMHNHGQVASTTKVVGTVGYMAPEVIKTGRASTQTDVYMFGILVLEVMCGRRPLVEGKPSLVEWVWQLMVQGQLINAVDEWLRAQGGVNEQVERVLHLGLLCAYPDPKARLTMRQAVKILEGKNEDGETESEDINTYLLQQMNSRDIFSEYSHYFNFSSHPTFEDIRHTHSSSTSLTWSNSVVVGR 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0962 680 FunFam L-type lectin-domain containing receptor kinase S.4 422 627 - -
Dere10g0962 680 CDD lectin_legume_LecRK_Arcelin_ConA 23 253 IPR001220 GO:0030246
Dere10g0962 680 Gene3D Phosphorylase Kinase; domain 1 309 421 - -
Dere10g0962 680 SMART serkin_6 347 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0962 680 Pfam Legume lectin domain 23 259 IPR001220 GO:0030246
Dere10g0962 680 Pfam Protein kinase domain 349 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0962 680 ProSitePatterns Protein kinases ATP-binding region signature. 353 374 IPR017441 GO:0005524
Dere10g0962 680 Gene3D - 22 265 - -
Dere10g0962 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Dere10g0962 680 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 260 IPR013320 -
Dere10g0962 680 FunFam L-type lectin-domain containing receptor kinase S.4 21 263 - -
Dere10g0962 680 PANTHER - 40 618 - -
Dere10g0962 680 Gene3D Transferase(Phosphotransferase) domain 1 422 631 - -
Dere10g0962 680 SUPERFAMILY Protein kinase-like (PK-like) 324 616 IPR011009 -
Dere10g0962 680 ProSiteProfiles Protein kinase domain profile. 347 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0962 680 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 309 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0962 Dere-ChrDere10 17986358 17988584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0962 22 563 Receptor kinase-like Gene Family AT4G04960 68.007 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere10g0962 Pkinase 6.2e-46 CL0016