Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0947 ATGCTGTCTATAAAGAAATTCTCTTTGAATTTATCATATAGGAGGCTAGTGTGGACTTCAGACCAAGGCAATTTCATCAAAAAGGAGGCGAGCAAGAACTTCAAGCAAATTTTCAAGGCTATATACCACAGCCTCCCACATGGGAAAATTGCTCATTTCACAGCCATTCTAGCAATTCTAGAGTCTATACTAGAGTATTCAGAAGTCATACACATAATAGACTTCGATATGGAAGAAGGGGTTCTATGGCCTCCAGTGATGGAGGCTATTGCCCACCAACAGAAAACATTGAAACTAACATCAATCAAATGGCAAGAAAAGGATAGCCCTGAACCAGATTGTGTTCCACCTAATGCAAATTTGAAGAAACCCGTAGGAACCTCTATGAGCATGCCAGATCAAGCGGTTTGGGATAAAAGGTGGAGGAAAAGGGTATTGAGGAATTGGTGA 450 0.4089 MLSIKKFSLNLSYRRLVWTSDQGNFIKKEASKNFKQIFKAIYHSLPHGKIAHFTAILAILESILEYSEVIHIIDFDMEEGVLWPPVMEAIAHQQKTLKLTSIKWQEKDSPEPDCVPPNANLKKPVGTSMSMPDQAVWDKRWRKRVLRNW 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0947 149 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 29 105 IPR005202 -
Dere10g0947 149 MobiDBLite consensus disorder prediction 107 130 - -
Dere10g0947 149 ProSiteProfiles GRAS family profile. 1 149 IPR005202 -
Dere10g0947 149 Pfam GRAS domain family 29 108 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0947 Dere-ChrDere10 17635364 17636739 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0947 14 136 GRAS Transcription Factor Family AT2G01570 33.333 4.20e-11 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere10g0947 GRAS 1.3e-13 CL0063