Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0932 ATGGGAAATTCCCCTACCTCTGTTTTAGTATTCTTACTTCATTGCTTTGAAGCCTCCATTGCTTGGAGCAACAAAAACATTACCACTGACAAATCTGCACTTCTTGCTTTTAAATCGTTCATCACGTTAGATCCTTACGATGTCTTAGCTAATTGGTCTATCTCGTCTTCTCCATGCAATTGGGTTGGTGTCACTTGCAATACTCGCCATGGAAGGATCTACTCCTTGAATCCTGGTGACATGGGTCTCACCGGCATCATAACTCCACAACTAGGAAATCTCTCATTTCTGGTTGAACTTAATCTTTCTAACAACAGTTTTCATGGTCAAATGCCGAAACAGTTAGTTCAATTGCCCAGATTGAAACTGCTCAACTTGAGCTACAATGAATTTGATGGAGAAATTCCAACATGGATAGGGAGTTTATCTAAACTTCAACAAATGAGTCTTCGCAATAATAGTTTCAGTGGGTTTATTCCGCAATCTGTGTCCAACCTGTCAAGGTTGGAGACCTTAGATTGGAATTATAATTATATTGAGGGGATCATTCCACTTGATATCAGAAGACTTAAGCACTTGAAGATTTTACGAATAGCGGCTAACAAACTTTCAGGAATTATACCCCCAACAATTTCCAACTTATCTTCGCTTGAATTATTGAGTTTGTCTCATAACACATTGTCAGGAGGCATTCCAAAAGGTATCGGCGATCTGCCACAACTAAGGAAACTGGATCTTTCAGATAATCAATTTTCTGATTATATTCCATCAACAATGTTTAACAACTCAGTGCTACAGAAGATTATTCTTTCTCATAATAATTTTTTTGGTGTTCTCCCATCAAATATATGTCATGGGGTTTCAAAACTTGAATTACTCTATCTATATGCAAATGACATCACTGGCAAGATACCATCTATTTGGCATCAATGTAAAGAATTAAAAGATCTGGAGTTGTCCGGCAACAAATTCAAAAGAGGATACATACCCAATGACATTGGAAATTTGACCAAGCTCCAATTCTTGTGCCTTGCAGTCAACAACTTGGAAGGTGAAATTCCATCATTTCTCTTCAATATTTCTTCTTTAAGAGAAGTCTATTTGTGGGGAAACAAACTACATGGTAGTCTCCCAATATCAATTGGCAATTGCACGTTGCTCGAAAAGTTGCATCTAGGTTACAACTCCTTTACAGGTGAAATTCCCCTGTCTCTTTTCAATATGCCTACTTTGAGAGACGTCTCCTTTCGCTTTAACCATTTACATGGTGTTCTACCACAACAAGTGTGCCATCAACTTCCATCACTTGTAAGTTTCAATTTGATTGGAAATCAATTCAAGGGAAGCATTCCAGAATCAATGAGCAATTGCAAATGTTTGAAAGAATTATATTTAGCTATCAACTCATTTACAGGTTTTATACCCAAGGAGATAGGCGATCTTGATAAACTTGAGGTTTTAGCTTTGGCAGATAACAATTTGAGTGGACCAATACCTTCCAATATTTTCAACATTTCAACATTGATAGACTTGAACCTTGGAGCTAATTTCCTCTCTGGCCTTCTCCCATCCAATATAGGAAGCCTTCCCAACCTGAAGGATTTGACTATGGAGCTAAACAAATTTACTGGACAAATTCCAAAAAGCATATCCAATGCTTCTAATCTCAATTATTTAGAGCTGGAGTTTAACAAATTCAGTGGAGTTATACCAAGTGCACTTGGAAATTTAACCAACTTGATCAGTGTAAGTTTATCTTCAAATGATTTGATTGGGCCTATCCCAACTAGAATTAACAAATTGCAAGGTCTTCAACATTTGGATCTTAGTGACAACAAATTGCAAGGCCCCATCTTAAATGAACTTTGCCAAATCAGAAGTTTGGGTTACTTATCTCTAGCCAACAACATGTTATCAGGATTGGTTCCAGGGTGCCTTTGGAATCTTACTTCGTTGCGATACTTGTACTTGGGCTCTAACAAATTGATTTCCCATATACCCTCTTCTATTTGGAGTCTTAGAGATATTTTAGAGTTAGATTTATCCAACAATGCATTGAGTGGAAGAATTCCATTTGATATTTCTAACTTGAGAGCACTTACACTGTTGAACTTGTCAACAAATCAAATTTCTGGAAACATTCCTACAACTATTGGTGGCTTGATAACTTTGCTAAACTTATCTTTGGCACATAACAAGTTGCAAGGTCCTATTCCTGAATCACTTGGTGGCATGATAAGCATTGAGTTCTTGGATCTTTCCCAAAATTATTTGTCCGGCGTGATTCCGAAGTCCTTAGAGTCTCTTGTGCATCTCAAATACATTAATCTTTCTTACAACTTATTGCATGGAGAAATTCCCAATGGTGGTCCTTTTAAAAAATTTTCAGCTGAATGTTTTAAGATGAATAAAGGTCTTTGTGGAAAGCCCCAACTACATGTCCAGCCATGCAAAGAAGGAAAAAAGCACAGGTCTACTAAAGAGATGCTTTTGATGAAATGCTTATTGCCTATCATGTTGGCAGTCATTTTGGTTGTTTTATGCATACTCTTTATAAAGCATAAAAGAGATTATATTAGTGATTCAACTAATAAGGATTTATTAAATTTGGGTACTCCAATCAGGATATCCTACTATGAGCTTATACAGGGAACAAATGGATTTGATGAGAGTAATCTTCTTGGCAGAGGAAGTTTTGGATCAGTATACAAAGGAATTCTTTCAAGTGGAATGATAGTTGCTGTTAAAATATTTAACTCCAACTTGGAAGATGCATTACGGAGCTTTGATGTTGAATGTGCTGCCATATGCAATTTACGTCATCGCAATCTCATTAAGATCATTGGCAGTTGTTCAAATGTTGATTTTAAATCTCTAATCATGGAATATATGTCAAATGGGAGTCTTGATAGATGGTTATACTCTCATAACTATTTCTTAGATATCTTGCAGAGGTTGAATATAATGATTGATGTGGCAACTGCATTGGAGTATCTTCATCATGGTTCTTCTATACCGGTGGTCCATTGTGATGTAAAGCCTAGCAATGTTTTGTTGGATGAAGATATGGTGGCCCATCTTGGTGATTTTGGTATTTCCAAACTCTTAGGTGAAGGGCAGTCGGAAATTTATACTATGACTTTGGCTACAATTGGCTATATGGCACCAGAGTATGGATCGAAAGGAGCTATTTCCACAAAAGGAGATGTTTATAGCTATGGTATTTTGCTGATGGAAATGTTTACAAGGAAAAAGCCAACAGATGATATGTTTGTTCAAGGTCAAAGTTTGAAAGAGTGGGTTAGCAAATCGACACCACATTCAATAATCAACATTCTAGATGCGAATTTGTTGCAAGGAGGCAATCAAAATATTGGTAACATATTATCACATATGTCGTCAATTTTTGAGTTGGCCTTAAATTGTTGCAATGATTTACCTGAGACACGAATCAATATGATCGAAGTTGTGGTGTCAATGAAAAAATTAAAATCATGTTTATGCAAATTGTTAGAGGCACCACTAGTTCAATAA 3534 0.3653 MGNSPTSVLVFLLHCFEASIAWSNKNITTDKSALLAFKSFITLDPYDVLANWSISSSPCNWVGVTCNTRHGRIYSLNPGDMGLTGIITPQLGNLSFLVELNLSNNSFHGQMPKQLVQLPRLKLLNLSYNEFDGEIPTWIGSLSKLQQMSLRNNSFSGFIPQSVSNLSRLETLDWNYNYIEGIIPLDIRRLKHLKILRIAANKLSGIIPPTISNLSSLELLSLSHNTLSGGIPKGIGDLPQLRKLDLSDNQFSDYIPSTMFNNSVLQKIILSHNNFFGVLPSNICHGVSKLELLYLYANDITGKIPSIWHQCKELKDLELSGNKFKRGYIPNDIGNLTKLQFLCLAVNNLEGEIPSFLFNISSLREVYLWGNKLHGSLPISIGNCTLLEKLHLGYNSFTGEIPLSLFNMPTLRDVSFRFNHLHGVLPQQVCHQLPSLVSFNLIGNQFKGSIPESMSNCKCLKELYLAINSFTGFIPKEIGDLDKLEVLALADNNLSGPIPSNIFNISTLIDLNLGANFLSGLLPSNIGSLPNLKDLTMELNKFTGQIPKSISNASNLNYLELEFNKFSGVIPSALGNLTNLISVSLSSNDLIGPIPTRINKLQGLQHLDLSDNKLQGPILNELCQIRSLGYLSLANNMLSGLVPGCLWNLTSLRYLYLGSNKLISHIPSSIWSLRDILELDLSNNALSGRIPFDISNLRALTLLNLSTNQISGNIPTTIGGLITLLNLSLAHNKLQGPIPESLGGMISIEFLDLSQNYLSGVIPKSLESLVHLKYINLSYNLLHGEIPNGGPFKKFSAECFKMNKGLCGKPQLHVQPCKEGKKHRSTKEMLLMKCLLPIMLAVILVVLCILFIKHKRDYISDSTNKDLLNLGTPIRISYYELIQGTNGFDESNLLGRGSFGSVYKGILSSGMIVAVKIFNSNLEDALRSFDVECAAICNLRHRNLIKIIGSCSNVDFKSLIMEYMSNGSLDRWLYSHNYFLDILQRLNIMIDVATALEYLHHGSSIPVVHCDVKPSNVLLDEDMVAHLGDFGISKLLGEGQSEIYTMTLATIGYMAPEYGSKGAISTKGDVYSYGILLMEMFTRKKPTDDMFVQGQSLKEWVSKSTPHSIINILDANLLQGGNQNIGNILSHMSSIFELALNCCNDLPETRINMIEVVVSMKKLKSCLCKLLEAPLVQ 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0932 1177 PANTHER LEUCINE RICH REPEAT KINASE 2 474 1166 - -
Dere10g0932 1177 SMART LRR_sd22_2 166 187 - -
Dere10g0932 1177 SMART LRR_sd22_2 649 665 - -
Dere10g0932 1177 SMART LRR_sd22_2 601 624 - -
Dere10g0932 1177 SMART LRR_sd22_2 481 507 - -
Dere10g0932 1177 SMART LRR_sd22_2 190 216 - -
Dere10g0932 1177 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 964 1172 - -
Dere10g0932 1177 ProSitePatterns Protein kinases ATP-binding region signature. 894 916 IPR017441 GO:0005524
Dere10g0932 1177 SUPERFAMILY RNI-like 317 639 - -
Dere10g0932 1177 Gene3D Ribonuclease Inhibitor 431 524 IPR032675 -
Dere10g0932 1177 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 430 522 - -
Dere10g0932 1177 Gene3D Ribonuclease Inhibitor 26 179 IPR032675 -
Dere10g0932 1177 Gene3D Phosphorylase Kinase; domain 1 852 963 - -
Dere10g0932 1177 FunFam Serine-threonine protein kinase plant-type 870 963 - -
Dere10g0932 1177 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 27 185 - -
Dere10g0932 1177 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Dere10g0932 1177 SUPERFAMILY L domain-like 29 322 - -
Dere10g0932 1177 SUPERFAMILY L domain-like 559 811 - -
Dere10g0932 1177 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 309 401 - -
Dere10g0932 1177 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 186 279 - -
Dere10g0932 1177 Gene3D Ribonuclease Inhibitor 327 430 IPR032675 -
Dere10g0932 1177 Gene3D Ribonuclease Inhibitor 525 826 IPR032675 -
Dere10g0932 1177 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 532 821 - -
Dere10g0932 1177 Pfam Protein kinase domain 889 1156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0932 1177 SMART LRR_typ_2 625 648 IPR003591 -
Dere10g0932 1177 SMART LRR_typ_2 336 360 IPR003591 -
Dere10g0932 1177 SMART LRR_typ_2 433 457 IPR003591 -
Dere10g0932 1177 SMART LRR_typ_2 142 166 IPR003591 -
Dere10g0932 1177 SMART LRR_typ_2 649 673 IPR003591 -
Dere10g0932 1177 SMART LRR_typ_2 745 768 IPR003591 -
Dere10g0932 1177 SMART LRR_typ_2 214 237 IPR003591 -
Dere10g0932 1177 SMART LRR_typ_2 697 721 IPR003591 -
Dere10g0932 1177 SMART LRR_typ_2 238 262 IPR003591 -
Dere10g0932 1177 SMART LRR_typ_2 769 793 IPR003591 -
Dere10g0932 1177 SMART LRR_typ_2 481 505 IPR003591 -
Dere10g0932 1177 SMART LRR_typ_2 529 553 IPR003591 -
Dere10g0932 1177 SMART LRR_typ_2 94 118 IPR003591 -
Dere10g0932 1177 ProSiteProfiles Protein kinase domain profile. 888 1163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0932 1177 Gene3D Transferase(Phosphotransferase) domain 1 964 1169 - -
Dere10g0932 1177 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1007 1019 IPR008271 GO:0004672|GO:0006468
Dere10g0932 1177 SMART serkin_6 888 1167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0932 1177 Gene3D Ribonuclease Inhibitor 180 326 IPR032675 -
Dere10g0932 1177 Pfam Leucine rich repeat 627 662 IPR001611 GO:0005515
Dere10g0932 1177 Pfam Leucine rich repeat 192 251 IPR001611 GO:0005515
Dere10g0932 1177 Pfam Leucine rich repeat 724 782 IPR001611 GO:0005515
Dere10g0932 1177 Pfam Leucine rich repeat 265 324 IPR001611 GO:0005515
Dere10g0932 1177 Pfam Leucine rich repeat 554 614 IPR001611 GO:0005515
Dere10g0932 1177 SUPERFAMILY Protein kinase-like (PK-like) 869 1158 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0932 Dere-ChrDere10 17303262 17313446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0932 7 1164 Receptor kinase-like Gene Family AT5G46330 33.755 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dere10g0932 Pkinase 5.5e-46 CL0016