Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0926 ATGGGTAGAGCTCCGTGTTGCGACAAGAATGGCCTCAAGAAAGGGCCATGGACACAAGAGGAAGACCACAAGCTCATTGACTACATTCAGAAACATGGCTATGGCAACTGGAGGACCCTCCCAAAGAATGCTGGGCTGCAAAGGTGGTCGATCATTGCTTCTCGCTTACCTGGAAGAACAGACAACGAGATCAAGAACTACTGGAACACCCACATCAGAAAGAGGCTCCTCCGCATGGGAATTGATCCTGTGACGCACAGCCCACGACTAGATCTCCTAGACCTCTCTTCCATTCTATCTTCATCATCTCTTTACGCCTCATCATCCCAAACCAGCAACTCGATCAACATCCAAAGGCTTCTAAATGGACTCGACCCTCTGCAGCTAAACCCAGAGCATGTAAAGTTAGCTTCCTCACTTGTCTCAATGTCTCACCATCAACCTCAAAACCTCAGCTTTTGTCCTCAAAGTGGTCACGACGACCCCCTTTTCCAAGCTGAACAAATGCCTTCAAGTTCAACCTCCACTTTTGTGGACCCATACCCTTCAGATTCAAACTTCATCAGCTACGTCCCTTATCAGTTTCCTAGCTATGGTTGTTACAGTAATAGTTCTGATCATATTATTCACCAGAGTGGTTTCATGGACCCTCCTCCATTGATCTCTGAGACAGAGGCCTCAACTTTCCAATGTTCAAATATTTACAGCAAAGGCCAGAACTTTGGGTTTGGGTCAGTGATATCGACGCCTTCTTCGAGTCCCACACCGTTGAATTCGAACTCGACGTGTACGGAGGATGAGAGAGACAGCTATGGTGGCGGCTGCAACGTGATGAATCTCGAAATCTCGGATGTTTTAGGTGTTAATGAGTTCATGTAA 879 0.4699 MGRAPCCDKNGLKKGPWTQEEDHKLIDYIQKHGYGNWRTLPKNAGLQRWSIIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSPRLDLLDLSSILSSSSLYASSSQTSNSINIQRLLNGLDPLQLNPEHVKLASSLVSMSHHQPQNLSFCPQSGHDDPLFQAEQMPSSSTSTFVDPYPSDSNFISYVPYQFPSYGCYSNSSDHIIHQSGFMDPPPLISETEASTFQCSNIYSKGQNFGFGSVISTPSSSPTPLNSNSTCTEDERDSYGGGCNVMNLEISDVLGVNEFM 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0926 292 CDD SANT 16 72 IPR001005 -
Dere10g0926 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 76 IPR017930 -
Dere10g0926 292 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 48 166 - -
Dere10g0926 292 Pfam Myb-like DNA-binding domain 14 71 IPR001005 -
Dere10g0926 292 SUPERFAMILY Homeodomain-like 8 82 IPR009057 -
Dere10g0926 292 SMART sant 13 74 IPR001005 -
Dere10g0926 292 ProSiteProfiles Myb-like domain profile. 9 72 IPR001005 -
Dere10g0926 292 Gene3D - 11 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0926 Dere-ChrDere10 17207748 17209462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0926 1 292 MYB Transcription Factor Family AT4G21440 44.022 6.91e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere10g0926 Myb_DNA-binding 4.5e-15 CL0123