Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0914 ATGCGCGGCTTCACTTTCTTTGAGCGAATATCTAGAGCTTTCTACGACCGTTCTCCGCATTTCAAACTTGTTCTGCTCTGCACCGTTAGTGGAGGCGGCCTTTTGGCTTATGCTGAGGCTCCTTCATCTGAAGCGATCAGCGACAAGAAAAAGGTGGTGGTCCTTGGAACCGGATGGGCAGGCACTAGTTTTTTGAAGAATCTGAATAACCCGAGATATGAGGTTCATGTGGTATCGCCTCGTAATTATTTTGCATTCACTCCCCTGCTGCCTAGTGTTACTTGCGGTACGGTCGAAGCGCGAAGCATTGTTGAACCCGTTCGCAATTTTTTCGGGAAGAAAAAGATGGACATTCAATTCAGTGAAGCAGAATGTCTGAAGATAGATGCAGAAAATAGGAAAGTCTACTGCCGATCCAATATAGAAAATAATTTGAATGAGAAAGATGAATTTGTTGTGGACTATGACTTACTTATAATAGCCGTGGGAGCTAATGTGAATACATTCAATACTCCAGGAGTGGTGGAGAATTGCCATTTCCTGAAGGAAGTAGAAGATGCTCAAAAAATCAGACGGACAGTTATTGACTGCTTTGAGAGAGCAAGTCTGCCAAATGTTAGTGAAGAAGATAAGAAGAGAATTCTTCATTTTGCTATTGTTGGAGGCGGCCCAACAGGAGTGGAATTTGCAGCATCACTTCATGACTTTGTCAATGAGGATTTGGTTAAATTATATCCAAGGATAAAAGATTTTGTTAAAATTACGCTTTTGGAGGCAGGAGATCATATTTTAAGCATGTTTGACAAAAGAATCACTGCTTTTGCTGAAGATAAGTTTCAAAGAGATGGTATAGATGTCAAAACTGGATCTATGGTTGTGAAAGTATCTGAGACAGAAATCTCTACTAAAGATATGAAAAACGGAGGAAACATTGCTACAATTCCTTATGGATTGGCTGTTTGGTCAACTGGTATTGGCACTCGTCCATTCATTAAAGATTTCATGAAACAAATTGGTCAGGCTAACAGGCGCGCTGTGGCTACGGATGAATGGTTGAGAGTTGAGGGATGCGACAATGTGTATGCACTTGGTGATTGTGCTACAATAAACCAGCGAAAAGTTGTGGAAGATATTGCCGCAATCTTTAAGAAGGCAGACAAAGACAATTCAGGAACACTTACTGCCAAAGAGTTTCAAGAGGTCATTGATGACATCTGTGAAAGATACCCTCAGGTTGAGCTGTATTTGAAGAATAAGCAGATGAGCAGCATTGCTGATCTTTTGAAGGAAGCCAAAGGAGATGTAAAAAAGGAATCTATAGAACTGAATATTGAAGAATTCAAGACCGCACTTTCCAATGTGGATTCTCAGATGAAATTTCTTCCTGCTACTGCACAGGTTGCTTCTCAGCAAGGCACCTACCTTGCCAAATGTTTCAACCGGATGGAAGAGTGTGGAAGAAATCCAGAGGGTCCTCTCAGGTTCAGGGGAGAAGGTCGCCATCGGTTCAAACCCTTTAGGTACAAGCATTTTGGTCAGTTCGCTCCTCTTGGAGGAGAGCAGACAGCTGCACAGCTTCCTGGGGATTGGGTATCAATAGGCCACAGCACCCAATGGCTATGGTATTCTGTGTATGCAAGCAAGCAAGTCAGCTGGCGCACAAGGGCCTTAGTGGTATCAGACTGGACCAGACGTTTTATTTTTGGGAGGGACTCAAGTCAAATCTGA 1728 0.4271 MRGFTFFERISRAFYDRSPHFKLVLLCTVSGGGLLAYAEAPSSEAISDKKKVVVLGTGWAGTSFLKNLNNPRYEVHVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNFFGKKKMDIQFSEAECLKIDAENRKVYCRSNIENNLNEKDEFVVDYDLLIIAVGANVNTFNTPGVVENCHFLKEVEDAQKIRRTVIDCFERASLPNVSEEDKKRILHFAIVGGGPTGVEFAASLHDFVNEDLVKLYPRIKDFVKITLLEAGDHILSMFDKRITAFAEDKFQRDGIDVKTGSMVVKVSETEISTKDMKNGGNIATIPYGLAVWSTGIGTRPFIKDFMKQIGQANRRAVATDEWLRVEGCDNVYALGDCATINQRKVVEDIAAIFKKADKDNSGTLTAKEFQEVIDDICERYPQVELYLKNKQMSSIADLLKEAKGDVKKESIELNIEEFKTALSNVDSQMKFLPATAQVASQQGTYLAKCFNRMEECGRNPEGPLRFRGEGRHRFKPFRYKHFGQFAPLGGEQTAAQLPGDWVSIGHSTQWLWYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSQI 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0914 575 PANTHER NADH DEHYDROGENASE 42 575 IPR045024 GO:0003954|GO:0006116
Dere10g0914 575 Pfam Pyridine nucleotide-disulphide oxidoreductase 50 374 IPR023753 GO:0016491
Dere10g0914 575 Gene3D - 42 420 - -
Dere10g0914 575 Gene3D - 421 574 - -
Dere10g0914 575 SUPERFAMILY EF-hand 331 462 IPR011992 -
Dere10g0914 575 ProSiteProfiles EF-hand calcium-binding domain profile. 373 408 IPR002048 GO:0005509
Dere10g0914 575 SUPERFAMILY FAD/NAD(P)-binding domain 49 268 IPR036188 -
Dere10g0914 575 SMART efh_1 377 405 IPR002048 GO:0005509
Dere10g0914 575 SUPERFAMILY FAD/NAD(P)-binding domain 210 370 IPR036188 -
Dere10g0914 575 ProSitePatterns EF-hand calcium-binding domain. 386 398 IPR018247 -
Dere10g0914 575 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 419 574 - -
Dere10g0914 575 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 40 402 - -
Dere10g0914 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 52 71 - -
Dere10g0914 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 155 173 - -
Dere10g0914 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 216 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0914 Dere-ChrDere10 17006197 17011095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0914 1 575 Chloroplast and Mitochondria Gene Families AT4G21490 72.337 0.0 866