Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0905 ATGACACTACTGCTTCCCCAGAATCAGAAGAGTGACTCTCTGCGTGCTTTGGATGATGCTCTGCTACATCACATCCACAGTAAGAAAAGAAGGTGGTTGCTGGAAGCTGATTCTTTTGAAGCAATGGGTCGTACAAATATGGGTTTGCATGTGCGAATCTTTGTCATGTCGATGGTGATTTTTACAGGAACTTTTTGTACTGGAGATACTGACCTGGTTGATGTTGCAGCAATCAATAGTTTATATGTTGCTCTGGGCTCACCACCTCTACAAGGTTGGAAAACCTTTGGGGGAGATCCATGTTCAGAAATGTGGCAAGGCGTGGCTTGTGTCTTCTCCAACATAACTGAATTACGACTCAGAGGAATGAATTTGGGTGGAGAGCTGGGCAGTAATTTGAATTTTTCCTCCATCATAGAAATAGATCTTAGCAACAACCACATTGGAGGGACCATTCCATCCACTTTACCCCCTACTCTGAGGAACTTGTCTCTTTCTGATAATCAGTTAACTGGAAGCATTCCAGATGCCCTATCCTCATTAACTCAACTGTCAGACTTGTCATTAAGCAATAACCTTCTAGATGGACAAATCCCTGATGCGTTTCAGCAGCTTACTGGTTTGGTGAACATAGACCTGTCAGGTAACAAGTTGAGTGGGCAGCTGCCCCCCACAATGGGGAATTTGTCACTGCTTACAACATTACACTTGCAGAACAATAAACTTTCTGGGATTCTTAATGTTTTGCAGGATCTTCCTCTTCAGGATCTGAATATAGAGAATAATCTATTCTCCGGGCCAATTCCTCCAAAATTGTTGAGTATCCCAAATTTCAGAAAAGATGGAAATCCATTTAATACTACTGTCATCCCATCACCTCCAGCTGCAGCCCCAGCTCCTGTTGCTATGCCTCCATCTCCTGAAGAAGCACCCTGGAAAGTGGCAAATAGTCCGTCTACCATAGAAACACCAATGCCTGCAAGTGCTAGGAAGTCTTTCATAACTAAGAATGTTATTTGGATTGCCGTTGCAGGGTTTTCTGTATTTATTGCACTAGGAATTTGTCTTTTTATGTTGTGGTGCTTTAAGAGAAGGTCAGAAAACAAAAATGCTAAGAAAAATGATGTGGGTGCATATACAATACCTTTACATGAACCTCAATACAGCGACTCTTCTTTTGAAATAACTAATCATGAGGAGAAAGTTGGGAAACCAATACCATTGCTAGAATATGGAGTACAAAATAGAAGAACGAATATGATTCCAAAGGTTCAGGATGAACAAGAAATACCTGTGAACAGAGTGTCTGCAGGTTCCAAACTTACAACGTTGCAGCTGCCACCATCTCCTCTTCCAATGATTCCTGGAAAGAAGGAATTCATCATACCAGCAATACCTACCAAAGAAACTGAAAGACAAGTTATGACAAGTTCCTTGCAAGTCTATACTATTGCATCACTTCAGCAGTATACAAATAGTTTTTCCCAAGAAAATTATATAGGGGAAGGCACACTTGGTGCTGTTTATCGGGCTGAGCTCCCTGATGGAAAGCAACTGGCAGTGAGGAAACTGGATGCTACTGCTTCCATTGGGCAAGACCAAGAACAATTTCTTCAATTAGTGTCCAATATCTCCAAAATTCAACATGCTAATATTGTGAAGCTTGTGGGCTACTGTGCTGAGCATGGTCAACGATTACTTGTATATGATTATTGCAGTAATGGAACTCTTCATAATGCACTGCATGAGGATACTGAACTCCATGCTAAACTGTCATGGAATACACGCATACAGGTGGCACTTGGAGCTGCAAGAGCTTTAGAGTATCTGCATGACAACTTTCAGCCGCCTATTGTGCACCGAAATTTTAGGTCAGCTAATGTTCTCCTGAATGATGAGCTTGAAGTACTTGTCTCTGATTGTGGATTAGGTCCTTTACTATCTTCTGGATCTACTGGTCAGTTGTCAGGACGCCTCCTTACATCATTTGGGTATGGCGCTCCAGAATTTGAGTCAGGAAGTTATACACAGCAGAGTGATGTCTTTAGTTTTGGAGTTGTAATGCTAGAACTCCTTACTGGACGAAAATCATCTGACAGGTCACGGCCACGTGGTGAGCAGCTTTTGGTTAGATGGGCAGTTCCTCAACTCCATGATATTGATGCATTATCAAATATGGTTGACCCCTCCTTAAATGGAGCCTATTCTATGAAGTCCTTGTCACGTTTTGCAGACATCATTTCTTCATGTGTACAGCGTGAACCAGAGTTCCGGCCAGCAATGGCTGAAATTGTGCAGGATCTCTTACGAATGATCTAG 2319 0.4213 MTLLLPQNQKSDSLRALDDALLHHIHSKKRRWLLEADSFEAMGRTNMGLHVRIFVMSMVIFTGTFCTGDTDLVDVAAINSLYVALGSPPLQGWKTFGGDPCSEMWQGVACVFSNITELRLRGMNLGGELGSNLNFSSIIEIDLSNNHIGGTIPSTLPPTLRNLSLSDNQLTGSIPDALSSLTQLSDLSLSNNLLDGQIPDAFQQLTGLVNIDLSGNKLSGQLPPTMGNLSLLTTLHLQNNKLSGILNVLQDLPLQDLNIENNLFSGPIPPKLLSIPNFRKDGNPFNTTVIPSPPAAAPAPVAMPPSPEEAPWKVANSPSTIETPMPASARKSFITKNVIWIAVAGFSVFIALGICLFMLWCFKRRSENKNAKKNDVGAYTIPLHEPQYSDSSFEITNHEEKVGKPIPLLEYGVQNRRTNMIPKVQDEQEIPVNRVSAGSKLTTLQLPPSPLPMIPGKKEFIIPAIPTKETERQVMTSSLQVYTIASLQQYTNSFSQENYIGEGTLGAVYRAELPDGKQLAVRKLDATASIGQDQEQFLQLVSNISKIQHANIVKLVGYCAEHGQRLLVYDYCSNGTLHNALHEDTELHAKLSWNTRIQVALGAARALEYLHDNFQPPIVHRNFRSANVLLNDELEVLVSDCGLGPLLSSGSTGQLSGRLLTSFGYGAPEFESGSYTQQSDVFSFGVVMLELLTGRKSSDRSRPRGEQLLVRWAVPQLHDIDALSNMVDPSLNGAYSMKSLSRFADIISSCVQREPEFRPAMAEIVQDLLRMI 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0905 772 SUPERFAMILY L domain-like 74 277 - -
Dere10g0905 772 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 572 772 - -
Dere10g0905 772 ProSiteProfiles Leucine-rich repeat profile. 159 182 IPR001611 GO:0005515
Dere10g0905 772 ProSiteProfiles Protein kinase domain profile. 494 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0905 772 Gene3D Ribonuclease Inhibitor 75 289 IPR032675 -
Dere10g0905 772 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 464 571 - -
Dere10g0905 772 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 71 296 - -
Dere10g0905 772 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 61 770 IPR046959 -
Dere10g0905 772 Pfam Protein tyrosine and serine/threonine kinase 497 768 IPR001245 GO:0004672|GO:0006468
Dere10g0905 772 Gene3D Phosphorylase Kinase; domain 1 462 571 - -
Dere10g0905 772 Gene3D Transferase(Phosphotransferase) domain 1 572 771 - -
Dere10g0905 772 Pfam Leucine rich repeat 158 218 IPR001611 GO:0005515
Dere10g0905 772 SUPERFAMILY Protein kinase-like (PK-like) 473 768 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0905 Dere-ChrDere10 16800923 16809580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0905 60 772 Strubbelig Receptor Gene Family AT4G03390 52.972 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Dere10g0905 PK_Tyr_Ser-Thr 4.7e-41 CL0016