Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0860 ATGTTCACCTTCACTCTCTTCTTGCTTGTCTCTTGTTGCTCTTTGACATCCTTGTTTCCAGGAGTTTCAGAAGCAAAGGATAGCATAACTTCGAGAGAATCCATCACTGAAAGCCATACACTAGTTTCCTCTGGTCAAAAATTTGAACTTGGTTTCTTTAGTCCTGGAAATTCCACTTACAAATATCTGGGAATATGGTACAAGTATATACCAAAGCATGCTGTTATTTGGGTTGCAAATAGGGACAACCCACTTGTAAATTCTACCGGCAGCTTAAGATTCAGCAATGATGGGAAGCTTGTCATTCTCAACCATACAGGAAGCATCATATGGTCTTCAGACTCATCCATGTCAGCAAGAAACCCATTAGCACAAATTCTAGACTCTGGAAATTTTGTCTTGAGAGATCTTGAAGATGAAAGCTCTGAGAGCTATAGATGGCAGAGTTTTGATTATCCATCTGACACGTTACTACCAGGAATGAGACTTGGTTGGAACTTCAAAACTGGCTTGAACAGACATTTAACCTCTTGGAAAGGCCCTGATGACCCTTCTTCTGGAGAGTATACATATAGTGTGGATCCACGTGGCCTTCCACAGCTTATTCTTCGCAAAGGGGAAAAGAAGGTCTTCAGAAGTGGACCATGGTTTGCACAACAATTCAAAGGTGATCCAGTTCTCATGGGAAACCCGGTTTTCAAACCTGTTTTTGTTTTTGATTCTGATGAAGTGTATTACTCATATGAGATTAAGGACAATGTCACTTCAAGATTTGTACTTACGCAATCCGGTTTGATTCAGCACTTCTCATGGAATGATCCTCATTCCACTTGGATATCTGAATTCACGGTTCAAGGAGGCCCTTGTGATAATTATGGCATTTGTGGTGCCTATGGTACTTGCAGCATCAAGGATTCCCCAATTTGCAAGTGTCTGAATGGGTTTGAGCCTAGATTACCTCAAGAGTGGCAAATGCTTAAATGGTCAGGTGGATGTGTTCGGAAGGATTTGCAGATTTGCAGAAATGAAGAGGGATTTAAGAAGCTTACACGGATGAAACTACCAGATTCTGCAGTGTTTCACACAAACTTAACCATGAGTTTTGATGACTGCGAGGCAATGTGCTTCAAGAATTGTTCTTGTGTGGCTTATGCTAAACTAGATATCGATACAAATGGTAAAGGCTGTGTTACTTGGTTTGGGGATTTATTTGATATCGGAGAGGACTCTGATTATGGGCAAGATCTCTACATCAGAGTTCCAGCTTCAGAACTAGGTTCGAATGCTGATGGCAAAAAAGGGAAGAAACCTATAACCGTTCCTGTGGTTGTATCAGTAACTTCAGCAACTGTTGTCTTGGTATCATGGCTCTTAATTAGGAGATGGAGAAAAAATGGTGCTAGAGGGCCAGACATTCAGTTCATACTTAACAGATCTAGAAGTGAACTCCCATCATTCGAGATTGCCATTATTGAAGCTGCAACAGAGAATTTCTGTGTCTCCAATAAGATTGGAGAAGGTGGATTTGGTCCTGTATACAAAGGTCAACTTGCATCGGGACAAGAAATAGCAGTGAAAAGGCTCTCAGAAAGTTCAGGACAAGGCCTGCAAGAGTTCAAGAATGAGGTTATTTTGATCTCCCAACTTCAGCATCGAAATCTAGTCAGGCTTCTGGGTTGCTGCATTCATAGAGATGAAAGAATGTTGATCTACGAGTACATGCCAAATGGAAGCTTAGACTCCTTACTATTCGATGAAACAAAGCGTTCAGCACTTACTTGGCAAAAGAGATTGGACATTATTACTGGGATTGCTAGGGGAATCCTATATCTCCACAGAGATTCGAGACTCAGAATAATCCATAGAGACCTGAAAGCTAGCAATGTTCTTTTAGATAGTGAGATGAACCCCAAAATTTCTGACTTTGGAATGGCCAGAATGTTTGCTGGAGATCAAACTGAAGCAAAGACCAGTATAGTAGTTGGAACCTATGGATATATGCCTCCGGAGTATGCAATTGATGGATACTTCTCATTCAAGTCAGACGTTTTCAGCTTTGGAGTCTTACTGTTGGAGCTGTTGAGTGGCAAGAAAAACAAAGGATTTATCCATCCGGATCACAAGCTGAATCTCCTTGGTCATGCATGGAAGCTTTGGATTGAAGAGAAGGCGTTGGAGCTGATGGATGCATTGCTTGAGAATCAGTTTCCTCCATCAGAAGCTCTAAGGTGTATCAAAGTGGGTCTTTTGTGCGTTCAACAGAACCCAGAAGAGAGGCCAACAATGTCATCAGTGCTTTTGATGTTAGACAGTGAGAGTGCTTTGCTGCCCCAACCTGGACGACCAGGGATCTATTCAGAGAGATGTTTCTCAGAGACAGATTCATCATCATTCGCAGGAATCAATTCGGCTTCCAATGACACAACCATCACCTTACTAGAGGGTCGTTAG 2451 0.4182 MFTFTLFLLVSCCSLTSLFPGVSEAKDSITSRESITESHTLVSSGQKFELGFFSPGNSTYKYLGIWYKYIPKHAVIWVANRDNPLVNSTGSLRFSNDGKLVILNHTGSIIWSSDSSMSARNPLAQILDSGNFVLRDLEDESSESYRWQSFDYPSDTLLPGMRLGWNFKTGLNRHLTSWKGPDDPSSGEYTYSVDPRGLPQLILRKGEKKVFRSGPWFAQQFKGDPVLMGNPVFKPVFVFDSDEVYYSYEIKDNVTSRFVLTQSGLIQHFSWNDPHSTWISEFTVQGGPCDNYGICGAYGTCSIKDSPICKCLNGFEPRLPQEWQMLKWSGGCVRKDLQICRNEEGFKKLTRMKLPDSAVFHTNLTMSFDDCEAMCFKNCSCVAYAKLDIDTNGKGCVTWFGDLFDIGEDSDYGQDLYIRVPASELGSNADGKKGKKPITVPVVVSVTSATVVLVSWLLIRRWRKNGARGPDIQFILNRSRSELPSFEIAIIEAATENFCVSNKIGEGGFGPVYKGQLASGQEIAVKRLSESSGQGLQEFKNEVILISQLQHRNLVRLLGCCIHRDERMLIYEYMPNGSLDSLLFDETKRSALTWQKRLDIITGIARGILYLHRDSRLRIIHRDLKASNVLLDSEMNPKISDFGMARMFAGDQTEAKTSIVVGTYGYMPPEYAIDGYFSFKSDVFSFGVLLLELLSGKKNKGFIHPDHKLNLLGHAWKLWIEEKALELMDALLENQFPPSEALRCIKVGLLCVQQNPEERPTMSSVLLMLDSESALLPQPGRPGIYSERCFSETDSSSFAGINSASNDTTITLLEGR 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0860 816 SMART blect_4 32 153 IPR001480 -
Dere10g0860 816 Gene3D Hepatocyte Growth Factor 338 412 - -
Dere10g0860 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 184 IPR036426 -
Dere10g0860 816 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Dere10g0860 816 Pfam D-mannose binding lectin 75 179 IPR001480 -
Dere10g0860 816 PIRSF SRK 1 816 IPR024171 GO:0004674
Dere10g0860 816 CDD STKc_IRAK 504 770 - -
Dere10g0860 816 SMART serkin_6 498 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0860 816 CDD PAN_AP_plant 341 421 - -
Dere10g0860 816 SUPERFAMILY Protein kinase-like (PK-like) 481 769 IPR011009 -
Dere10g0860 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Dere10g0860 816 Gene3D Phosphorylase Kinase; domain 1 470 573 - -
Dere10g0860 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 150 - -
Dere10g0860 816 Pfam S-locus glycoprotein domain 211 318 IPR000858 GO:0048544
Dere10g0860 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 473 573 - -
Dere10g0860 816 Pfam Protein tyrosine and serine/threonine kinase 501 766 IPR001245 GO:0004672|GO:0006468
Dere10g0860 816 Gene3D - 21 150 IPR036426 -
Dere10g0860 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 574 777 - -
Dere10g0860 816 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 6 760 - -
Dere10g0860 816 Pfam PAN-like domain 340 406 IPR003609 -
Dere10g0860 816 SMART ntp_6 341 420 IPR003609 -
Dere10g0860 816 CDD B_lectin 32 153 IPR001480 -
Dere10g0860 816 ProSiteProfiles PAN/Apple domain profile. 340 421 IPR003609 -
Dere10g0860 816 Gene3D Transferase(Phosphotransferase) domain 1 574 775 - -
Dere10g0860 816 ProSiteProfiles Protein kinase domain profile. 498 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0860 816 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0860 Dere-ChrDere10 15891301 15895066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0860 420 783 Receptor kinase-like Gene Family AT4G05200 52.304 8.89e-125 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere10g0860 PK_Tyr_Ser-Thr 2e-51 CL0016