Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0852 ATGAAGCTCTTTTCTGCTAAAGAGATAATACTCATCAGTATTCCATTATTCCTTCTCTTCCTCCTTTCTTCTTGTCACTCTCTTGATAGAATAACACCAAGCCATCCCCTCAAAGACGGCGACGTTTTGGTATCCGACAAAGCAACCTTCGCCCTCGGTTTCTTCAGTCCCAGCAATGATTCCACAAACCGGTATGTCGGAATTTGGTACAACAAAGTTTCGGAACAAACCGTTGTGTGGGTTGCGAACAGAGAAAATCCTCTGAATGATAGTTCTGGAGTTTTCTCCATCAACACCCACGGAAACGTCGTCGTGCGCAACGGCTTGAACCTTAACCTCAACCCCATTTGGTCTTCCAACGTCTCGCTCTCATCTCCCACTGATACCTTCGCGAAGCTTCTTGACACAGGAACCTTGGTCTTGATCGAGAATGGAGAAAGGCAAAAGGTTCTATGGCAGAGTTTCGATTATCCCTGCGACACCCTGCTTCCGTTTATGAAACTCGGCTTGGACCGGAAAACCGGTTTAAACCGGTTCCTTACGTCATGGAAATCCCCAACCGACCCAGGATTCGGCAACGTGAGCTACAGGATCGACCCAATCGGCTTCCCTCAGTTATTCTTGTACAAAAACGAGGATCCACTATGGCGGGTCGGGTCATGGACGGGTCAACGATGGAGCGGAGTACCCGAGATGACACCCAACTTCATCTTCAACGTTAGCTATGTTGACAATGCGAGTGAAGTCAGCATAATGTACGGAGTGAAGGACCCTTCGGTCTTTTCACGAATGGTGCTGGAAGAGAGCGGTCACGTCAGGCGAACCACGTGGCAAGCTCAGGAGAGTAGATGGTTCGAAATCTGGTACGGTCCGAAAGAGGACTGCGACAGCTTCCGACGGTGCGGGTCGAATAGTAACTGTGACCCGTACAATGCGGACAAGTTTGAGTGTGTTTGTTTGCCGGGATTCGAACCCAAGTACCCGCGAGAATGGTATCTGAGAGACGGGTCGGGTGGGTGCGTGAGGAAGAAGAATGCGTCCACGTGTCGGAGCGGGGAGGGGTTCGTGAAGGTGGCACGTGTGAAGGTGCCAGATACGTCAAAGGCACGTGCGGATATGAGCGTGAGTGTGAGCTTGAAAGGTTGCAGGGACAAGTGCCTCTGGGACTGTTCGTGCGCAGCGTATACAAGTGTAAACGAAAGCACAGAGAGTGGGTGTCTGACGTGGCATGATGACATGGAAGATATTAGGACGTACAGCAGTGTGGGACAAGATTTGTACGTGCGTGTGGATGCTTCTGAACTAGCCAAATATGAAAAGAAGCCTTATGGTTCTCTTGGCAAGAAGGGGATGGTGGCACTGTTAGTTGTTTCTTCTTTCCTGATAATTTTTCTGGTGATCTATTTCATGTATTGGTTTGTGAAGAACAAGATGCAAGCAAAATCAAGGCACAGCAAAAATTTGCTTCATTATAACTTTGAGGACTCTCCCAGTATACATGACCTTGACAGAGGAAATAATTCAGATCTACCATTTTTTGATCTAAGTGACATAGCTGCAGCAACTGAGAATTTCTCTACTGCTAACAAGCTCGGACAAGGCGGTTTCGGCACTGTTTATAAGGGTCTACTGAGTAATGGAATGGCAATAGCAGTGAAGAGGCTGTCAAAGTATTCTGGACAAGGCATTGAAGAGTTCAAAAATGAGGTTGCTTTAATTGCAAAGCTCCAACATAGAAATCTTGTGAGGATCTTAGGCTGCTGTATACAAGGAGAGGAGAAGATGTTGATCTATGAGTATTTGCCAAACAAAAGCTTGGATTCTTTTATTTTTGATCAAGTGAAAAAATTCCAGCTAGACTGGAGGAAACGATTTGATATCATCTGTGGGGTTGCAAGAGGGATCTTATACCTTCATCAAGATTCAAGATTAAGAATCATTCATAGAGACTTGAAGGCTAGCAATGTCTTGTTGGACTCTGAATTGAACCCAAAAATTGCAGATTTCGGTATGGCTAGGATAGTTGGTGGAGACCAAATTGAAGCGAACACAAATCGTGTCGTTGGAACCTATGGTTACATGTCACCAGAATATGCCATGGAAGGGTTATTCTCTGTGAAGTCTGATGTATACAGCTTTGGTGTTTTGCTTCTAGAGATTGTTACTGGCAGAAAGAATAGTAATCATGACGACGAAATCACCTCAACTTTGGTCGGACATATTTGGGACCTGTGGAGAGAAGGAAGAGCCATGGAGATTATCGATCCTTCACTACTAAGCGAGACATGCCCTGAACCTGAACAAGAAGCTCTAAAATGTATCCAGATTGGTCTTCTATGTGTACAAGACTACGCAACAGACAGACCAACTATGTCAGCAGTTGTTTCCATGTTGGGAAGTGAGTCAACTCTTCCTCCTCCTAAACAGCCAGCTTTTATTTTCAAGAGAAGTACTTGTGACACTTCGAATCCATCAACTAGTGAAGGAGTTAATTCAGTGAATGGAGTGAGTATTACTATGATTGAAGCTCGCTGA 2535 0.4552 MKLFSAKEIILISIPLFLLFLLSSCHSLDRITPSHPLKDGDVLVSDKATFALGFFSPSNDSTNRYVGIWYNKVSEQTVVWVANRENPLNDSSGVFSINTHGNVVVRNGLNLNLNPIWSSNVSLSSPTDTFAKLLDTGTLVLIENGERQKVLWQSFDYPCDTLLPFMKLGLDRKTGLNRFLTSWKSPTDPGFGNVSYRIDPIGFPQLFLYKNEDPLWRVGSWTGQRWSGVPEMTPNFIFNVSYVDNASEVSIMYGVKDPSVFSRMVLEESGHVRRTTWQAQESRWFEIWYGPKEDCDSFRRCGSNSNCDPYNADKFECVCLPGFEPKYPREWYLRDGSGGCVRKKNASTCRSGEGFVKVARVKVPDTSKARADMSVSVSLKGCRDKCLWDCSCAAYTSVNESTESGCLTWHDDMEDIRTYSSVGQDLYVRVDASELAKYEKKPYGSLGKKGMVALLVVSSFLIIFLVIYFMYWFVKNKMQAKSRHSKNLLHYNFEDSPSIHDLDRGNNSDLPFFDLSDIAAATENFSTANKLGQGGFGTVYKGLLSNGMAIAVKRLSKYSGQGIEEFKNEVALIAKLQHRNLVRILGCCIQGEEKMLIYEYLPNKSLDSFIFDQVKKFQLDWRKRFDIICGVARGILYLHQDSRLRIIHRDLKASNVLLDSELNPKIADFGMARIVGGDQIEANTNRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVTGRKNSNHDDEITSTLVGHIWDLWREGRAMEIIDPSLLSETCPEPEQEALKCIQIGLLCVQDYATDRPTMSAVVSMLGSESTLPPPKQPAFIFKRSTCDTSNPSTSEGVNSVNGVSITMIEAR 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0852 844 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 789 - -
Dere10g0852 844 Gene3D - 25 155 IPR036426 -
Dere10g0852 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 155 - -
Dere10g0852 844 Pfam S-locus glycoprotein domain 216 326 IPR000858 GO:0048544
Dere10g0852 844 SMART blect_4 34 158 IPR001480 -
Dere10g0852 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 492 600 - -
Dere10g0852 844 ProSiteProfiles PAN/Apple domain profile. 349 431 IPR003609 -
Dere10g0852 844 PIRSF SRK 1 844 IPR024171 GO:0004674
Dere10g0852 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 601 806 - -
Dere10g0852 844 ProSiteProfiles Bulb-type lectin domain profile. 28 154 IPR001480 -
Dere10g0852 844 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Dere10g0852 844 Pfam D-mannose binding lectin 77 184 IPR001480 -
Dere10g0852 844 Pfam PAN-like domain 349 416 IPR003609 -
Dere10g0852 844 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 189 IPR036426 -
Dere10g0852 844 CDD PAN_AP_plant 347 430 - -
Dere10g0852 844 CDD STKc_IRAK 531 798 - -
Dere10g0852 844 ProSiteProfiles Protein kinase domain profile. 525 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0852 844 Gene3D Transferase(Phosphotransferase) domain 1 601 804 - -
Dere10g0852 844 ProSitePatterns Protein kinases ATP-binding region signature. 531 553 IPR017441 GO:0005524
Dere10g0852 844 Pfam Protein tyrosine and serine/threonine kinase 527 798 IPR001245 GO:0004672|GO:0006468
Dere10g0852 844 SMART ntp_6 350 430 IPR003609 -
Dere10g0852 844 ProSiteProfiles EGF-like domain profile. 291 329 IPR000742 -
Dere10g0852 844 Gene3D Phosphorylase Kinase; domain 1 495 600 - -
Dere10g0852 844 SMART serkin_6 525 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0852 844 SUPERFAMILY Protein kinase-like (PK-like) 509 798 IPR011009 -
Dere10g0852 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Dere10g0852 844 CDD B_lectin 34 158 IPR001480 -
Dere10g0852 844 Pfam Domain of unknown function (DUF3403) 801 844 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0852 Dere-ChrDere10 15754414 15759251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0852 513 844 Receptor kinase-like Gene Family AT4G11530 56.471 3.81e-123 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere10g0852 PK_Tyr_Ser-Thr 2e-49 CL0016