Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0849 ATGGGTGAGGAGTTTCAGACTGAGATTTGTGGTGGGAATTACTGGTGGAATAATACTATGAACTCAACAACGAGAAGTGTTTTCCCTCTGATCATCAGTACTTCATCTCCCTGTTCTGTGGGAGGGATCAGCTGCGGCGCATGGCAGGCTGAGACGGTGGACTTGAAGGCCACAGCAACAACGAGGTCTTGTTCTGATCGCGACGACAGTCCTAATCATACTACTAGTGTGGTTTCTGTTTCTGATAGCTCTTTGGGTTTTCTCGATGCAACGAAGCCACTGTTACAGCATCAGACTAGTGGAGCAGGCAGTACAGGAAACAATAATATTAATGGTGCCATCTTCATGGATTCCTCCTTGCAAATGATGGGTTTCGATCTCTCATCATCGAATTGGAATCATTCTCCGTTGAGTCGTTGGAGTGGAAGATCGGGAGAGAGCAATTTCCATAATACCATGCTTCAAGAGGAGACAGGGACAGATAGTTGTGGAGGTAATTCACAAAGCCAAGATCAGAAGAGAGCGATTTCCAATATGAAGCAAATGATGCAACAAGATGTGTGTGGGGATTTCCCATTAGGATCGTCGTCATATGGCTACCCTTCAAGCTCAACGTTAATTCAAAGCCTATATGATATTCCTCAACCACAACCCCAACAATCACTTTTCACCAACCCACCATCTTTGGCCTATTCAAGTACACCAAATTATGGGGCAGTATCATCATCATCTTCTTCTTCCAAAGAATTACTATCTTCTTCGCTTTTCAAGCCTAGTGGGTTACACTTTTCCAACAGTACTCCTTTCTGGAATGCTTCGGCTGAAACACTACATGACATAAGAGCAGATGTATTTGCCCCATCTTCACAACCACAGCAATATCAAACTTCATCATTAATAAATGAAAAACCCAGTTTCCCAAGCTCGCTCAATACAAAGCCCAAGAGGGAAGAAGAAGCTCCGGACTCGGCATCGGTAAAGAAAAGTTCATGTGAACCTGCAATCAAGAAACAAAGAATTGAAACCCCATCACCATTACCCACTTTTAAGGTTCGGAAAGAGAAGCTAGGGGACCGAGTTACTGCTCTTCAGCAACTGGTGTCACCTTTCGGAAAGACTGATACTGCATCTGTTCTTCACGAGGCCATCGAGTACATCAAGTTCCTTCATGATCAAGTCAGTGTTTTGAGTACTCCATACATGAAAAACGGAGCTCCCAGCCAACACTGGCAGCAGGGTTCTGATCTGAAGGACTCAGAAGGGCCAAAACAAGACCTACGAAGCCGAGGGCTGTGCTTGGTGCCGATTTCAAGCACTTTCCCAGTGACTAACGAAACCACTGTTGAATTCTGGACGCCATCATTTGGAGGCGCACTCATCAGGTAG 1386 0.4509 MGEEFQTEICGGNYWWNNTMNSTTRSVFPLIISTSSPCSVGGISCGAWQAETVDLKATATTRSCSDRDDSPNHTTSVVSVSDSSLGFLDATKPLLQHQTSGAGSTGNNNINGAIFMDSSLQMMGFDLSSSNWNHSPLSRWSGRSGESNFHNTMLQEETGTDSCGGNSQSQDQKRAISNMKQMMQQDVCGDFPLGSSSYGYPSSSTLIQSLYDIPQPQPQQSLFTNPPSLAYSSTPNYGAVSSSSSSSKELLSSSLFKPSGLHFSNSTPFWNASAETLHDIRADVFAPSSQPQQYQTSSLINEKPSFPSSLNTKPKREEEAPDSASVKKSSCEPAIKKQRIETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYMKNGAPSQHWQQGSDLKDSEGPKQDLRSRGLCLVPISSTFPVTNETTVEFWTPSFGGALIR 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0849 461 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 340 389 IPR011598 GO:0046983
Dere10g0849 461 MobiDBLite consensus disorder prediction 156 175 - -
Dere10g0849 461 CDD bHLH_AtbHLH_like 346 397 IPR045239 -
Dere10g0849 461 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 350 406 IPR036638 GO:0046983
Dere10g0849 461 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 170 441 - -
Dere10g0849 461 Gene3D - 350 414 IPR036638 GO:0046983
Dere10g0849 461 MobiDBLite consensus disorder prediction 291 311 - -
Dere10g0849 461 MobiDBLite consensus disorder prediction 404 424 - -
Dere10g0849 461 MobiDBLite consensus disorder prediction 291 342 - -
Dere10g0849 461 FunFam Transcription factor bHLH123 family 350 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0849 Dere-ChrDere10 15674347 15677043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0849 1 461 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 37.967 3.07e-65 213