Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0845 ATGGATTATGCAGATGAGGATGGGTTATGTGCTACTTTTGATGAGTTGTGTGATACTAATGAAAGTGGTGGCATTAGGGGAAGCATGAGCAGGAAGAGGAAATATGATGACGACGATGACACAAAAGTGTACAAATCCAAGAATCTCAAGACCGAGAGGAAAAGGAGGGAGAAGCTCAGTAGTAGACTGTTGATGCTGCGATCTTTAATGACTAGAGCAACCATAATTGAAGATGCCATCAACTACATTAAGAATATGCAAGATCAAGTCGAGAGTCTCACTAAAGAGCTTCAAGCAATGGAAGCGAGTTCGGAGAAAACAGCAGAATCAAAGAAAGATGAAATAGATGCAGCAGAAGAGATGAAGAAATGTGGAATACAGGCAGAGGTCAAGGTGACACAAATTGATCGGAATAAGCTGTGGGTGAAGATCATCATTGAGAAGAAAAAAGGAAGATTCAAGAAACTGATAGAGGCCATGAATACCTTTGGCATTGAACTCATAGACACCAATGTTACCACCACAAAAGGAGCATTTCTAATTACAACATGCATTCAGGACATGAATGGTGAAAGACTTGCAGCTCAGCAAACCCAGGAGTTGATTCTTGATATTACTAGGGCCATATAG 630 0.4063 MDYADEDGLCATFDELCDTNESGGIRGSMSRKRKYDDDDDTKVYKSKNLKTERKRREKLSSRLLMLRSLMTRATIIEDAINYIKNMQDQVESLTKELQAMEASSEKTAESKKDEIDAAEEMKKCGIQAEVKVTQIDRNKLWVKIIIEKKKGRFKKLIEAMNTFGIELIDTNVTTTKGAFLITTCIQDMNGERLAAQQTQELILDITRAI 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0845 209 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 30 195 - -
Dere10g0845 209 Coils Coil 76 121 - -
Dere10g0845 209 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 38 100 IPR036638 GO:0046983
Dere10g0845 209 Gene3D - 41 113 IPR036638 GO:0046983
Dere10g0845 209 SMART finulus 49 92 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0845 29 208 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 37.949 4.70e-38 129