Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0842 ATGGATGATAATCGCACAATGTGGTTAGCCCCATATAAGATTATCAAGGCGCCTAATGGAGATTCGGTTTTCGAAGCATTTGGGCGGATTTATACTGCTACTGTGCTACCTATATTGGGAATCATTAATGAACCCACTGCTGCTGCACTTTCATATAGGATGAACAATAAGAAGGGTCTAATTGTGCTGCCTACAACCTCGGTTGACTATGAAAATCAGATAGATTACATCAAGTTGCTGCAAGGTGGTAGACAGAGGTTCTTCAACAACCTAGTTGGAAAATTTAAAATTGTTGGCATTCCGCCTGCTCCTAGACATATACCTCAAATTTTGGTCCCATTTGTCATTGATGCCAACGAGATTATAACTGTCTTTGCAAAAGACAAGTCCATTGGTTTTGATGTTGCCGAAATATTGACTAATGTGTTCATTAGCAAAGGTGAGAAGGACTTGAAAGAGATCAGAGAAATAATTCCAAGTGACATTGTCAAACTGATTGAGGATAAAGTTGCTGATTTGAAGATGGCAAGGTCAGGGAACTCTTTAATCGTATAG 555 0.3928 MDDNRTMWLAPYKIIKAPNGDSVFEAFGRIYTATVLPILGIINEPTAAALSYRMNNKKGLIVLPTTSVDYENQIDYIKLLQGGRQRFFNNLVGKFKIVGIPPAPRHIPQILVPFVIDANEIITVFAKDKSIGFDVAEILTNVFISKGEKDLKEIREIIPSDIVKLIEDKVADLKMARSGNSLIV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0842 184 PANTHER HEAT SHOCK PROTEIN 70KDA 65 145 IPR013126 GO:0005524|GO:0140662
Dere10g0842 184 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 62 178 IPR029047 -
Dere10g0842 184 Pfam Hsp70 protein 76 137 IPR013126 GO:0005524|GO:0140662
Dere10g0842 184 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 65 134 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0842 Dere-ChrDere10 15569116 15570974 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0842 77 158 Calmodulin-binding Proteins AT3G12580 45.783 1.18e-13 66.6