Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0839 ATGGAAATGGGTTCCTCACTGTTGCCTCTTTTACCCATCATTGGTGCTCTTATGGTGGTGAGATGGCTTCTCAAGAATGTGAATTGGTGGCTGTATGAGTCAGGGTTAGGTGAGAAGCAGTACTCTCTTCCCTTAGGAGACATGGGCTTGCCCTTCATTGGCAATATGTGGTCTTTCTTCTCTGCCTTCAAGTCTGATGACCCTGATTCCTTCATCGCCTCCTTTGTCTCCAGATTTGGACACACTGGAATATACAAGGCCTTGATGTTTTGGAGGCCGAGTTTTATCGTCACAACACCTGAAACATGCAAGAGAGTTTTAACAGACGACGACAAGTTTCAGCCAGGTTGGCCTTCTTCCACCGTGGAGCTCATTGGAAGAAAGTCTTTCATTGCAATGCCTTACGAAGATCACAAGCGTCTTAGGCGTTTGACTGCTTCTTCCATCAATGGCACACAAGCATTGAGCTTGTACTTGACATACATTGAAGACATTGTCAAGTCCTCGTTGGACAAGTGGAGCAACATGGGACAGATCCAGTTTTTAACGGAGCTCCGAAGGCTAACGTTTCGGATCATTACGCATATTTTCCTGAGCTCTGACACTCAGAATGTTATGGAGACTTTGGAGAGGGAGTACACTACTCTGAATCTGGGTATTAGAGCTTTGAAGATTAATGTTCCTGGATTTGCATATCATAAGGCCCTCAAGGCTAGGAAAAATCTAGTGGCTGCACTTCAAATTATTGTTGAAAAGCGAAAAAAGGAAAGGAAGGAAAATGACTCTAGAGATACCAAAGACATGATGGATGCACTATTGGATGTGGAAGACGAAAATGGAAGAAAATTGGAGAATGAAGAAATCATTGATATTCTGATAATGTATTTGAATGCTGGTCATGAATCTTCAGGACATATTATGATGTGGGCAACAGTTTTCCTGCAACAACACCCTCAAATATTCCAGAAGGCTAAGGAAGAACAGGAGGAAATCATTAAAAGAAGGCCTCCAACACAGAAGGGGTTGACACCCAAGGAAATTCGACAAATGGATTACATTTCTAAGGTGATTGATGAAACATTGCGTTTGGTTACATTCTCGTTGATGGTCTTTCGGGAGGCAAAATCAGATGTCAATATCAATGGCTACACTATTCCGAGAGGATGGAAAGTTCTTGTTTGGTTCAGGACTCTTCACCTTAATCCTGAGATTTATCCAAATCCAAAGGAATTCGATCCTTCCAGATGGGATAATAATACACGTAAGGCTGGAGAATTTCTTCCCTTCGGAGCTGGAAGTAGAATGTGTCCTGGAAGTGACCTTGCAAAGCTAGAAATCACAGTTTTTCTTCATCACTTTCTTCTAAATTATAGGCTTGAGCAACTCAATCCTGGGGCCCCTGTGTTGTACTTGCCCCATACGAGGCCCAAAGACAATTGCTTGGCAAGGATTCATAGGATGAATGACTAA 1470 0.4265 MEMGSSLLPLLPIIGALMVVRWLLKNVNWWLYESGLGEKQYSLPLGDMGLPFIGNMWSFFSAFKSDDPDSFIASFVSRFGHTGIYKALMFWRPSFIVTTPETCKRVLTDDDKFQPGWPSSTVELIGRKSFIAMPYEDHKRLRRLTASSINGTQALSLYLTYIEDIVKSSLDKWSNMGQIQFLTELRRLTFRIITHIFLSSDTQNVMETLEREYTTLNLGIRALKINVPGFAYHKALKARKNLVAALQIIVEKRKKERKENDSRDTKDMMDALLDVEDENGRKLENEEIIDILIMYLNAGHESSGHIMMWATVFLQQHPQIFQKAKEEQEEIIKRRPPTQKGLTPKEIRQMDYISKVIDETLRLVTFSLMVFREAKSDVNINGYTIPRGWKVLVWFRTLHLNPEIYPNPKEFDPSRWDNNTRKAGEFLPFGAGSRMCPGSDLAKLEITVFLHHFLLNYRLEQLNPGAPVLYLPHTRPKDNCLARIHRMND 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0839 489 CDD CYP90-like 76 486 - -
Dere10g0839 489 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g0839 489 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g0839 489 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g0839 489 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g0839 489 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g0839 489 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g0839 489 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g0839 489 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g0839 489 Pfam Cytochrome P450 49 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g0839 489 Coils Coil 206 226 - -
Dere10g0839 489 Gene3D Cytochrome P450 35 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g0839 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Dere10g0839 489 SUPERFAMILY Cytochrome P450 40 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g0839 489 PANTHER CYTOCHROME P450 26 40 476 - -
Dere10g0839 489 FunFam Ent-kaurenoic acid oxidase 34 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0839 Dere-ChrDere10 15504208 15507382 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0839 2 486 Cytochrome P450 AT2G32440 64.536 0.0 684