Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0828 ATGACGTCATACACTTCCTTCCTGTTGCTTCTTCTTTTGCTCTTGTATTCCGTTTTGGCCTCTGCAAAGTCTGCTGAGAAGTCTGGTGATGGCGATGATGAGGCATTTGGTTCATCACCTGGAGGAGCTGGAGGTGATGCTATTTTCACCCTGGAGGTACCAAAACTGGATGAGACCACTCTGGACAATCTGCTATCCTTTGGTTACTATCGGAAAGCCTGTCCACAATTCGAAGCCATCGTGCACCGAAAGGTGAAGGAATGGATTCAAAAGGATTACACTTTAGGTGCCAGTCTCCTTAGGTTGCACTTCCATGATTGCTCTGTTAGGGGATGCGATGCATCTATTTTGTTGAACCACGAAACAAGCGAGAGGAGAGCAGAGGCAAGCAAGACACTGAGAGGGTTCGAAGTGATAGACGATATCAAAGCGGAGGTGGAGAAGCATTGCCCCAAAATGGTGTCGTGTGCTGATATTCTAAGTGGGGCCACCAGAGATGCCACCGTGGAGTTGGGTGGGCCGTATTGGGCCGTACCCTATGGCCGCAAAGATGGTCGGGTTTCCATGGCCCACGAAGCCCAAATCGTCCCAATGGGTCACCAAAACGTCACTTCCTTGATTGAGTTTTTCCAATCCAAGGATTTGAATGTCCTCGACTTGGTGGTTCTTTCAGGAGCTCACACTATCGGGAGGGCTTCATGCGGTTCCATTCAAGACAGGATCTACAACTACAAAGGAACAGGAAAACCAGACCCCTCCATAGATCCCAAGTACCTCAACTTCTTGCAGAGAAAGTGTCGATGGGCCTTGGAGTATGTCGATCTCGACGCCACTACGCCCAGGACCTTCGATCCTATGTACTATCTCAACCTCAAGAAGAACATGGGACTCTTGTCCACAGATCAGTTGCTATATTCTGATACAAGGACCTTACCCCTTGTTTCCACGTTAGTTGGCACAACCTCGTCCCTGTTCAACCACCAGTTTGCTGTCTCCATGGCCAAACTTGCCAATGTCGGAGTGCTTACTGAGGATGAAGGAGAAGTCAGAACCAACTGCAATTTTGTCAATGCTTATTAG 1080 0.487 MTSYTSFLLLLLLLLYSVLASAKSAEKSGDGDDEAFGSSPGGAGGDAIFTLEVPKLDETTLDNLLSFGYYRKACPQFEAIVHRKVKEWIQKDYTLGASLLRLHFHDCSVRGCDASILLNHETSERRAEASKTLRGFEVIDDIKAEVEKHCPKMVSCADILSGATRDATVELGGPYWAVPYGRKDGRVSMAHEAQIVPMGHQNVTSLIEFFQSKDLNVLDLVVLSGAHTIGRASCGSIQDRIYNYKGTGKPDPSIDPKYLNFLQRKCRWALEYVDLDATTPRTFDPMYYLNLKKNMGLLSTDQLLYSDTRTLPLVSTLVGTTSSLFNHQFAVSMAKLANVGVLTEDEGEVRTNCNFVNAY 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0828 359 Gene3D - 68 357 - -
Dere10g0828 359 FunFam Peroxidase 197 336 - -
Dere10g0828 359 Pfam Peroxidase 82 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere10g0828 359 ProSiteProfiles Plant heme peroxidase family profile. 64 357 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere10g0828 359 FunFam Peroxidase 68 211 - -
Dere10g0828 359 CDD secretory_peroxidase 65 356 IPR033905 GO:0004601|GO:0042744
Dere10g0828 359 Gene3D Peroxidase, domain 2 197 336 - -
Dere10g0828 359 PRINTS Haem peroxidase superfamily signature 276 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere10g0828 359 PRINTS Haem peroxidase superfamily signature 172 184 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere10g0828 359 PRINTS Haem peroxidase superfamily signature 219 234 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere10g0828 359 PRINTS Haem peroxidase superfamily signature 154 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere10g0828 359 PRINTS Haem peroxidase superfamily signature 96 110 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere10g0828 359 PANTHER PEROXIDASE 25-RELATED 15 344 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere10g0828 359 ProSitePatterns Peroxidases proximal heme-ligand signature. 219 229 IPR019793 -
Dere10g0828 359 PRINTS Plant peroxidase signature 290 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere10g0828 359 PRINTS Plant peroxidase signature 274 289 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere10g0828 359 PRINTS Plant peroxidase signature 74 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere10g0828 359 PRINTS Plant peroxidase signature 153 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere10g0828 359 PRINTS Plant peroxidase signature 218 230 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere10g0828 359 PRINTS Plant peroxidase signature 98 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere10g0828 359 PRINTS Plant peroxidase signature 134 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere10g0828 359 PRINTS Plant peroxidase signature 331 344 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere10g0828 359 PRINTS Plant peroxidase signature 172 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere10g0828 359 ProSitePatterns Peroxidases active site signature. 96 107 IPR019794 GO:0004601
Dere10g0828 359 SUPERFAMILY Heme-dependent peroxidases 65 357 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0828 Dere-ChrDere10 15161657 15164622 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0828 61 358 Peroxidase AT1G30870 61.667 9.66e-135 386