Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0809 ATGTTAGCCGGAGCAATTTTCCATCGGTGTTCCCCGGCCATGATTTTCTTGCCTCTGTTTTTTCTCTGCCTCGTTGGTTCGTCCCAGTCAGATGAGCTTCAGGCCCTTATGAAGTTCAAGTCCTCTGTTCGAACTTCAAGTGCCGGTGATGTTTTCAGTTCCTGGACAGAATATAATGCTCACTGCAACTTTACTGGGATTGTCTGCAATTCTAATGGGTTTGTTTCAGAAATCAATCTCGCCCAAAAACAACTTGTGGGTACTCTTCGTTTTGATTCAATTTGCGAGCTTCAATTGCTCGAGAAAATTTCTATGGGGTCGAACTTCTTTCATGGAAGCATCAGTGAGGACTTGGGGAAGTGCATTAATTTGCAGTATTTGGATTTGGGTGTGAATTCGTTTTCTGGGATGGTGCCTGATTTCTCTAATTTGAACAAGCTGAAGTATTTGAACTTAAATGCCAGCGGAATTACTGGGGCTTTTCCATGGAAATCATTAGGAAATCTAACTAGTCTTAGATTTTTAAGCCTTGGGGATAACCTATTGGAAAGAAATCCCTTTCCTGTGGAGGTGCTAAAGCTTGACAAATTGTATTGGCTTTACCTCTCAAATTGCAGTATCACAGGGAAAATTCCATTGGGTATTGGGAATCTAACTCAGCTTGAGAATCTTGAGCTTTCTGATAACCAGTTGACTGGTGAAATCCCAGGTGAAATTGTAAAGCTTCAGAAGCTTAAACAACTTGAACTATATGACAACTTCTTGATTGGGAAAATCCCAATAGGATTTCGTAACCTTACAAATCTTGTCAACCTCGATGTTTCTAATAATCAGCTTGAAGGTGATCTTTCTGAGCTCAGGTTCTTGAAAAACTTAGCTTCTCTTCAGCTTTTTCAGAACCAATTCTCTGGAGGAATTCCAAATGAGTTTGGAGATTTCCAGAGCCTCACAGAATTTTCTCTTTATTCAAATAATCTCACTGGTCCTCTCCCTCAAAATCTTGGCTCCTGGGTAGGCTTACAATATATTGATGTTTCTGATAACTCTCTTTCTGGTCCTATACCCCCTGACATGTGCAGGAACGACAAAATGATCGAGTTAGCTATGTTAAACAATAGCTTCACTGGAAGTATACCAGAAACATATGCGAATTGTACATCTATTGTTCGCTTTCTCGTTAACAGAAACTCACTTTCTGGTCGTGTTCCTTCGGGTTTATGGGGCCTGCCGAAGATGGAAATAATTGATCTTTCCATGAACCATTTTGATGGTCCAATGGCATCTGATATTGCAAAAGCACAATCTCTTGCACAACTGTTTTTATCTGGCAATGAGTTCTCAGGTGTGTTACCATTGGCAATCTCGGAAGCTTCTTCATTGGTATCAATTACGCTGAGTTCAAATCAATTCTCTGGTCACATCCCAGAAACAATTGGCAAGTTGAAGAAATTGAGTAGTCTTAAATTGAATGGAAACAATTTTTCTGGCTCCATGCCAGAGTCTTTAGCTGCTTGTATTTCTCTTAGTGAAATAAACCTTGCCGGTAACTCACTTTCTGGGGAAATTTCTACAAGTCTTGGGTCTCTGCCCACTCTCAATTCATTGAACTTGTCTTCAAATAGACTTTCTGGTGAAATTCCTTCGAGTTTATCTTCTCTTAGACTCAGCCTTCTTGATTTATCAAACAACAAGTTGTTTGGTCCCATACCAGAATCGCTCTCTATTCGGGCATTCACAGATGGTTTTAAGGGAAATCCTGGCTTATGCAGCAAGACTTCGGAAAATTTTAGGCCATGTTCGTTGGATAGCACCGGCTCTAGTAGAATCAGAAGCGTTATTCTCTATTTCATTGCTGGTATAATGGTTCTGATAATTTTATTTATATGTTTACTCTTCCTCAAACTGAAGCAGAACAAGTCTAAGAAGCCTTTAAAGACTGATTTCTGGGACCTGAAGCGGTATCATGTACTAAACTTCAATGAAAATGAAATCATTGAAGGCATCAAGGCCGAGAATCTGATTGGCAAAGGTGGATCGGGGAATGTTTACAAGGTTGTTCTCAAATGTGGCAAAGAATTGGCAGTCAAACACATATGGACTTCAAATCTGGGCGAATCAGGAAGTTGCCGGAGCAGCTCATCTATGCTAAAAAGGAGTTGCGGGTTGCGAGAGTATGATGCAGAGGTGGCCACACTGAGCTCCATAAGGCATGTGAACGTGGTGAAGCTCTATTGTAGCATCACAAGTGAAGATAGTAGCCTGCTTGTTTACGAGTTCTTACCAAATGGGAGCTTGTGGGATAGGCTGCACGATTGCATGACTCAGATGGGATGGGACGTTAGGTATGAGATTGCATTGGGAGCAGCTAGAGGATTGGAGTATCTGCATCATGGGTGTGATAGGCCAATTATTCACAGAGATGTGAAATCAAGTAATATTCTGATTGATGAGGAATGGAAGCCAAGGATTGCAGACTTTGGGCTTGCCAAGATTGTGCAGGGAGGAGCAGGCAATTGGACTCATGTCATTGCAGGAACACTGGGATATATGGCTCCTGAGTACGCCTACACTTGTAAGGTGACCGAGAAGAGTGATGTGTACAGCTTTGGGGTAGTTCTAATGGAGTTGGTGACAGGGAAGAAGCCGAATGAACTAGAGTTCGGAGAGAACAAGGACATTGTCCACTGGGTATGCTGCAACAATTGGACCAAAGAAGAACTGGTTGAACTGGTGGATTCTGCAATTCCAAAGCATTTCAAAGACGATGCCTTGAAGGTTCTGAGAATTGCTACACTCTGCACTGCGAAGATTCCAACTTCAAGACCTTCTATGAGAATGGTGGTTCAAATGCTGGAAGAGGCAGAGCCTTGCACTCTGACGAATGTTATTGTGACTAAGGATAGTTAA 2907 0.4176 MLAGAIFHRCSPAMIFLPLFFLCLVGSSQSDELQALMKFKSSVRTSSAGDVFSSWTEYNAHCNFTGIVCNSNGFVSEINLAQKQLVGTLRFDSICELQLLEKISMGSNFFHGSISEDLGKCINLQYLDLGVNSFSGMVPDFSNLNKLKYLNLNASGITGAFPWKSLGNLTSLRFLSLGDNLLERNPFPVEVLKLDKLYWLYLSNCSITGKIPLGIGNLTQLENLELSDNQLTGEIPGEIVKLQKLKQLELYDNFLIGKIPIGFRNLTNLVNLDVSNNQLEGDLSELRFLKNLASLQLFQNQFSGGIPNEFGDFQSLTEFSLYSNNLTGPLPQNLGSWVGLQYIDVSDNSLSGPIPPDMCRNDKMIELAMLNNSFTGSIPETYANCTSIVRFLVNRNSLSGRVPSGLWGLPKMEIIDLSMNHFDGPMASDIAKAQSLAQLFLSGNEFSGVLPLAISEASSLVSITLSSNQFSGHIPETIGKLKKLSSLKLNGNNFSGSMPESLAACISLSEINLAGNSLSGEISTSLGSLPTLNSLNLSSNRLSGEIPSSLSSLRLSLLDLSNNKLFGPIPESLSIRAFTDGFKGNPGLCSKTSENFRPCSLDSTGSSRIRSVILYFIAGIMVLIILFICLLFLKLKQNKSKKPLKTDFWDLKRYHVLNFNENEIIEGIKAENLIGKGGSGNVYKVVLKCGKELAVKHIWTSNLGESGSCRSSSSMLKRSCGLREYDAEVATLSSIRHVNVVKLYCSITSEDSSLLVYEFLPNGSLWDRLHDCMTQMGWDVRYEIALGAARGLEYLHHGCDRPIIHRDVKSSNILIDEEWKPRIADFGLAKIVQGGAGNWTHVIAGTLGYMAPEYAYTCKVTEKSDVYSFGVVLMELVTGKKPNELEFGENKDIVHWVCCNNWTKEELVELVDSAIPKHFKDDALKVLRIATLCTAKIPTSRPSMRMVVQMLEEAEPCTLTNVIVTKDS 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0809 968 ProSiteProfiles Protein kinase domain profile. 668 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0809 968 SMART serkin_6 668 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0809 968 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 760 962 - -
Dere10g0809 968 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 187 953 - -
Dere10g0809 968 Pfam Protein kinase domain 671 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0809 968 Gene3D Ribonuclease Inhibitor 286 459 IPR032675 -
Dere10g0809 968 ProSiteProfiles Leucine-rich repeat profile. 268 290 IPR001611 GO:0005515
Dere10g0809 968 Gene3D Phosphorylase Kinase; domain 1 652 759 - -
Dere10g0809 968 ProSitePatterns Protein kinases ATP-binding region signature. 674 696 IPR017441 GO:0005524
Dere10g0809 968 Gene3D Transferase(Phosphotransferase) domain 1 760 962 - -
Dere10g0809 968 FunFam Receptor-like protein kinase HAIKU2 651 759 - -
Dere10g0809 968 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Dere10g0809 968 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Dere10g0809 968 FunFam Nuclear pore complex protein NUP107 29 187 - -
Dere10g0809 968 SUPERFAMILY L domain-like 61 374 - -
Dere10g0809 968 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Dere10g0809 968 SUPERFAMILY Protein kinase-like (PK-like) 658 952 IPR011009 -
Dere10g0809 968 FunFam Leucine-rich receptor-like protein kinase family protein 188 285 - -
Dere10g0809 968 Gene3D Ribonuclease Inhibitor 188 285 IPR032675 -
Dere10g0809 968 Gene3D Ribonuclease Inhibitor 460 599 IPR032675 -
Dere10g0809 968 FunFam Leucine-rich repeat receptor-like protein kinase TDR 286 601 - -
Dere10g0809 968 SUPERFAMILY RNI-like 289 564 - -
Dere10g0809 968 CDD STKc_IRAK 674 953 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0809 Dere-ChrDere10 14555729 14559299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0809 6 968 Receptor kinase-like Gene Family AT1G09970 56.392 0.0 1038
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere10g0809 Pkinase 4.7e-44 CL0016