LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere10g0800	ATGTTGGAGTCACTAGCTTATTGCCAAAGCTTTAAGGGCTATGATATTACCAAACAGAAGAGTCCAATTTGGGCTTACCCTGATGCTATTTCACGAAGATGTAGAAGATCTATTTTCATGCTATATTCAGATGACAAACATGCCCCGCTTCTATTATCACACCGAGTTAATCACAGGATAAGCCGTAGAATTTCCGTGACTGAAAATTTGTTTGAACACACAACTTCCTTTGCTTCCTCATTCTCTGGTACGAAAGGATACTATTCCTCTAAGTACAGGCCAATGCATTGGGAGTGGTTGCGAACAAGTGCGGCATATGATGTTGCTGGTGCTGTTGAAGTCATTAATGATTTAGGATTGGATACTCTTACATTCTTGGCTGTGACTGTCTTAATTGTGCCCACATTCAAGTTACTTAAAGCTAGCCCGATTCTTGGTTTCTTCTTTGCTGGAGTTGTACTCAATCAGTTTGGTTTAATTAGAAACCTTACAGATGTTAAAGTTTTGTCTGAATGGGGGATCCTGTTCTTGCTATTCGAGATGGGTTTAGAGCTTTCACTTGCACGTCTGAAAGCTCTTGCAAAATATGCTTTTGGAATGGGATTGGCTCAGGTTGTATTATCTACTCTAGCATTCACTGCTTTTGAACTTCCACCTAATGGAGCTATTGGCACAAAAATTTTGGAGTTCCTATTCCACTCAAGGCCTGATCTAGTGAACATCAGGAGTATTGATGAAGCTGTAGTAATTGGAGCTGCTCTCTCTCTGTCATCTTCTGCATTTGTTCTACAGCTTCTTGCAGAGAAAGGCGAGCTTCCTACAAGATTTGGATCAGCAACTCTTGGAATACTTCTTTTGCAGGACATAGCTGTTGTCCCACTTTTGGTCATTCTTCCAATACTAGAGAGCCAGAATTTGGCTGAGGAAAGTATTTGGCCAATGCTTGCTCAAGAAAGTTTAAAGGCTTTGGGTGGATTGGGTCTATTGTCCCTTGGAGGAAAATACATTCTTAGAAGAGTTTTTGAGGTTGTTGCAGATGCCAGGAGCTCAGAGGCTTTCATTGCTCTCTGCTTGCTGACCATTGCTGGGACATCGCTCCTTACCCAGAAATTGGGCTTCAGTGATACGCTTGGAGCATTTTTGGCTGGGGCACTCTTAGCAGAGACAAACTTTAGGACACAGATTGAAGCTGATATAAGACCATTCAGAGGCTTACTTCTTGGGTTATTTTTTCTAACTACAGGGACTTCCATTGACATGCAGCTACTTTCTCGAGAGTGGCCAAACGTGCTTTCACTCTTGGTAGGTTTAATTGCCATCAAGACTTTGATTATAACAGCTATCGGTCGTCGTGTGGGGCTTGCATTTCAAGAAAGTGTAAGAATAGGATTGCTGCTGTCCCAAGGAGGCGAGTTTGGATTTGTCATTTTCTCTTTAGCAAATAGTCTTGGGGTGTTACCACTTGAGCTCAACAAGCTACTCATAATTGTAGTTGTACTGTCAATGGCATTAACCCCATTTCTTAATGAGGCTGGAAGAAGGGCTGCTGGATTCATTGATGAGAAGTTTGATGCAGGAAATAAAGCTTCTGAGAATGTTAATTTCAATACCAGTGAACCTGTTGTAATCCTTGGATTTGGACAAATGGGTCAGGTCCTTGCCAATTTCCTGTCCAATCCGTTGGCTTCAGGAGGAGCTAGTGATACAGTAGGATGGCCTTATGTGGCTTTTGATCTTGACCTTGCAGTGGTAAAGGCAGCTAGAAAACTTGGTTTTCCCACTCTATATGGGGATGGATCACAACCAGCCGTTCTTCAATCTGCTGGTATCTCTTCTCCGAAGGCTATCATGGTTATGTACACTGGAAAGAAGAGAGCAATTGAAGCTGTTCAGAGGCTACGATATACTTTCCCTTCAATCCCAATCTATGCTAGAGCTCAAGATCTCAAGCATCTTTTAGAACTAAAGAAAGCAGGTGCAACAGATGCCATTTTGGAGAATGCAGAGACAAGCTTACAGCTAGGTTCTAAGCTTTTGAAAGGCCTAGGAATGATGTCTGATGATGTAGCATTTCTGAGTCAGCTCATTCGTGATTCCATGGAGCTACAAGCTCAAGAAGCACTCAACCACTCAGAATATCGTGAATTAGATATACTAAAACCACTGCAGGTGAGAGTAGCTGACATGATTGAGGCACGTGTACCTACATTGTCAACTTCTTCAGAATTGAACCAGACAGATCATGCTTCAGTGACCAGAATTCAGACGGAAGTGGACTCTGAAGAAGGGGGTTATGAACTCAATCAAGCAGGGTGTTTAGAAGGAAATGGCGTTTTATGTAGCAAACCGGGTACTGAAGAAAGCTTGATGGATGAATCACAAGATGCTTTAGGAGAGAACAATCTGGTGGACCCATCAGTCCCTTGTCACACAGCCATTGAGGAACCCTGA	2451	0.4255	MLESLAYCQSFKGYDITKQKSPIWAYPDAISRRCRRSIFMLYSDDKHAPLLLSHRVNHRISRRISVTENLFEHTTSFASSFSGTKGYYSSKYRPMHWEWLRTSAAYDVAGAVEVINDLGLDTLTFLAVTVLIVPTFKLLKASPILGFFFAGVVLNQFGLIRNLTDVKVLSEWGILFLLFEMGLELSLARLKALAKYAFGMGLAQVVLSTLAFTAFELPPNGAIGTKILEFLFHSRPDLVNIRSIDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDIAVVPLLVILPILESQNLAEESIWPMLAQESLKALGGLGLLSLGGKYILRRVFEVVADARSSEAFIALCLLTIAGTSLLTQKLGFSDTLGAFLAGALLAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDMQLLSREWPNVLSLLVGLIAIKTLIITAIGRRVGLAFQESVRIGLLLSQGGEFGFVIFSLANSLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAAGFIDEKFDAGNKASENVNFNTSEPVVILGFGQMGQVLANFLSNPLASGGASDTVGWPYVAFDLDLAVVKAARKLGFPTLYGDGSQPAVLQSAGISSPKAIMVMYTGKKRAIEAVQRLRYTFPSIPIYARAQDLKHLLELKKAGATDAILENAETSLQLGSKLLKGLGMMSDDVAFLSQLIRDSMELQAQEALNHSEYRELDILKPLQVRVADMIEARVPTLSTSSELNQTDHASVTRIQTEVDSEEGGYELNQAGCLEGNGVLCSKPGTEESLMDESQDALGENNLVDPSVPCHTAIEEP	816

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere10g0800	816	FunFam	Glutathione-regulated potassium-efflux system protein KefB	538	710	-	-
	Dere10g0800	816	MobiDBLite	consensus disorder prediction	797	816	-	-
	Dere10g0800	816	ProSiteProfiles	RCK N-terminal domain profile.	540	672	IPR003148	GO:0006813
	Dere10g0800	816	Gene3D	-	117	515	IPR038770	-
	Dere10g0800	816	PANTHER	K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC	103	738	-	-
	Dere10g0800	816	FunFam	K(+) efflux antiporter 3, chloroplastic	117	516	-	-
	Dere10g0800	816	Gene3D	-	540	710	-	-
	Dere10g0800	816	Pfam	Sodium/hydrogen exchanger family	124	509	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600
	Dere10g0800	816	Pfam	TrkA-N domain	541	664	IPR003148	GO:0006813
	Dere10g0800	816	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	539	682	IPR036291	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere10g0800	Dere-ChrDere10	14416328	14426877	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere10g0800	1	729	Inorganic Solute Cotransporters	AT4G04850	73.388	0.0	1006