Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0793 ATGGAGAATTATTCGTACCCTTCGTATCCAGATTCGGGGGATTCCTCTCCACGCTCTAGAGAGATCGATTTCGAGAACCCTCCGCCGTGGGACGATCAGCAACCACCGCCTAATTACAAAGCTAAGTTCATGTGCAGCTATGGCGGCAAGATCCAACCACGAACCCACGACAACCAGCTCTCCTATGTCGGCGGCGAGACCAAGATCCTCGCCGTCGACCGCAACATCAAGTTCCCTGCCATGATCTCCAAGCTCTCCGCCCTCTGCGATGGCGCCGACGTCACCTTCAAGTACCAGCTTCCCGGCGAGGATCTCGACGCGTTAATATCTGTTACTAACGACGACGATCTCGAGCACATGATGCACGAGTACGATCGGCTCTTCCGGGCCTCGGCTAAACCAGCTCGTATGAGGCTCTTCCTCTTCACTGTCAGTAACACAGCGGCGAGTTTTGGGTCTGATCGAGATCGCTTCGTCGAGACTCTTCCGACGGGTCCGGGACAACTGGCCGCACCCGACCCGGTTAAGCCCGCGCCTGTTTCTGGAAACAACGTCGACTTCCTCTTCGGTCTCGAAAAGGGGGTGCCTCCTCATGCCCAGCCACCGCCAGAGGCAGTGAAGTTCCATGATCCAGTGCCGGAACCTGCGGCGGCGGCGCCCCCGCCACCGGAGTACCAAGTACGAGGAGTGGTAAACCCTGGTGATCGGGTAATTGGATCGGATCATGCTGCGAACCCGCTTGAGATTCATAGGCAATTGCAGCAGGAAATGCAGCGGTTTCAGATTTCTGATCATGATCAGTCTGGGTATCGCAGAAGGAGCGAAGACAATCTAGTTGGAGGTTACACCGCCGGCGATTACTACGTCCAGAAGTTACCCGAAAAAGCTCCGCCGGCTAATTTCCCAGCATCCGCACCACACCCGGCAAGTTATTGGCCGGAGAAGCATCTCTCCGGCGAAGGTTTCCCCGTGACGGTATCGAACGCGCCGGGAGCGGCGGACAAACCAGTTTACGTATTCCCAGCTCCGGGAACGTTCTACCATGGACAGATGGTGCCTCCACCGACGGTGACAGCCACTCAAGGGTACTACACAGTGCAGCGAATGGCTTCTGATGGTTTCCGGGAGCAGCAGGTGTACGCCGGAGCACCACCGCAGAAGCCACCGTTTTCATCAGCGGCTCCGGTGACGATGGCACCGGCGCAGCCGGTTAAAGCTGCCACATATACAGAAGGATACAGTGTGGTTAGGCCAGCAGGAATACCGGATAACACGGCGGGTGCCTACGCACAGGTGGCGTATGATAGTGCAAGTGGGAGACAGGTTTACTATACTGCTCCCGGTGGTGGTGTGGTGCACGCGCCGCCGTACCAGGGGGTTGCTCCGCCGACCAGCAGTGAACTGAGATCGGCTGGGGTATCATATGGTCATGATGTTAAAGTGGTAAACAAGGTTCCACAAGGTTCAGTGTGA 1473 0.5689 MENYSYPSYPDSGDSSPRSREIDFENPPPWDDQQPPPNYKAKFMCSYGGKIQPRTHDNQLSYVGGETKILAVDRNIKFPAMISKLSALCDGADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLFRASAKPARMRLFLFTVSNTAASFGSDRDRFVETLPTGPGQLAAPDPVKPAPVSGNNVDFLFGLEKGVPPHAQPPPEAVKFHDPVPEPAAAAPPPPEYQVRGVVNPGDRVIGSDHAANPLEIHRQLQQEMQRFQISDHDQSGYRRRSEDNLVGGYTAGDYYVQKLPEKAPPANFPASAPHPASYWPEKHLSGEGFPVTVSNAPGAADKPVYVFPAPGTFYHGQMVPPPTVTATQGYYTVQRMASDGFREQQVYAGAPPQKPPFSSAAPVTMAPAQPVKAATYTEGYSVVRPAGIPDNTAGAYAQVAYDSASGRQVYYTAPGGGVVHAPPYQGVAPPTSSELRSAGVSYGHDVKVVNKVPQGSV 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0793 490 MobiDBLite consensus disorder prediction 1 37 - -
Dere10g0793 490 CDD PB1_UP2 44 142 - -
Dere10g0793 490 MobiDBLite consensus disorder prediction 1 15 - -
Dere10g0793 490 SMART PB1_new 55 144 IPR000270 GO:0005515
Dere10g0793 490 PANTHER OS05G0427100 PROTEIN-RELATED 9 413 - -
Dere10g0793 490 Pfam PB1 domain 56 142 IPR000270 GO:0005515
Dere10g0793 490 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 60 144 - -
Dere10g0793 490 Gene3D - 61 143 - -
Dere10g0793 490 SUPERFAMILY CAD & PB1 domains 56 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0793 Dere-ChrDere10 14342645 14344117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0793 39 151 MAP Kinase Kinase Kinase AT5G57610 48.673 4.74e-28 116