Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0778 ATGCCAGACATGGGACAACTTCGTTTCTCTGTCATCTTGTTCTCACTGCATTGTTTCATGGCCTCCATAGCTTGCAGTATGGCGAACATAGCTACTGATAAATATGCACTTCTTGCCTTCAGATCTTCTATTACCAGGGATCCATACAATCTCTTAGCTAATTGGTCTGTCTCTTCTTCTCCATGCAATTGGATTGGTGTCAGCTGCAATATTCGCCATGGAAGAGTCCGTTCCTTGAATCTTAGCAACATGAGTCTTAGTGGCAACGTATCTCCACAATTGGGAAATCTCTCATTCCTTGCCGAGCTTGATCTTAGTAGCAACAATTTTGATGGTCTATTGCCAAAGGAATTCGTACAATTGCGTCGATTGAAACTACTCAACTTGGGACTCAATAAATTTGATGGAGAAGTTCCAACATGGATAGAAAGTTTATTTACACTTCAGCACTTGATACTTGTAAATAATAGTTTTAGTGGATATATTCCACTTTCTGTATCGAACTTGTCAAGGTTGGAGACCTTGGATTTGGGAGCTAATTTCATTGAGGGGCCCATTCCACTTGCAATTGGAAGGCTTAATAACTTGAAGAGTTTAGCACTTGGAGCTAACAGGCTTTCTGGAAATATACCTCCGACGATTTCCAACTTAACTTCTCTTGAATTTTTGAGTTTGGCTTATAACTCTTTATCAGGAGGCTTTCCAAAAGAGATTGGTGATCTTTCACAATTAACAATATTGTATCTTTCACACAATCAGCTTTCTGGTCCTATACCATCAAAAGTGTTTAACAACTCAGTGCTAGAGGAGATTGATCTTTCTTATAACAATTTTAATGGTGCTCTCCCGTCAAATATTTGTCCTGAGGTTTCAAAACTTGAAGTACTCTTGCTACAAGCAAATAACTTCACTGGCAAGATACCATGTGTTTTGCAATGCAAAGAATTAGAAGATTTGGAATTGTCCTTTAACAGATTCAACAAAGGATACATACCAAGTGACATTGGAAATTTGACGAATCTACAATACTTATACCTCTCGAACAACAGCTTGGAAGGTGAAATTCCCCTGTTTCTTTTCAACATGACTTCTTTAAGAGAGATTAACCTTGGCTTCAACCATTTACATGGTAATCTGCCGCAAGAAATGTGCCATCAACTTCCTTTACTTGAAATTTTTGATTTGATTGGAAATCATTTTAAGGGAAGCTTTCCAAAATTATTGAGCAACTGCACATCTTTGAAAGGAATATATTTGGCTCTCAACTCAATTACAGGTTCTATACCCAAAGAGATAGGCAATCTTGTCAAACTTGAGGAAATAGAATTGGGAGATAACTATTTGAGTGGATCTATTCCTTCCAATATGTTCAACATTTCAACATTGACACGTGTGCACCTTGGAGGTAATTCCCTCTCTGGCCTTTTCCCATCAAATATGGGAAGTTTCCTTCCCAACCTATACGCATTGGAACTCGGGGACAATGAACTAACTGGAGAAATTCCGAAGAGCATATCCAATGCTTCCAAGCTCAATGAGTTAGACCTACGTTTGAATAAATTTAGCGGACTTATTCCTGATGCGCTTGAGAATTTAACCAGGCTGGGGAAATTAACTCTATATTCGAATGATCTGAATGGGCGCATTCCAAGTAACATAAACAAATTGCAACGTCTTCAATATTTAGATCTCAGTTACAATAGTTTGCAAGGCTTCATCATAAACGAACTTTGCCAAATCAGAAGTTTGGGTTTCTTGTCTTTAGCCAACAACATGTTCTCAGGATCGATTCCAGGGTGCCTTGGGAATCTTAAAATGTTGCAACAATTGTACTTGCGCTCTAACAAATTGATTTCTAATATTCCTTATTCTGTTTGGACACTCAGAGACATTTTGGTGATAGACCTATCCAGCAATGCATTGAGCGGAAAAATTCCACTTGAGATTTCAAACTTGAGAGCACTTACACTGTTGGACTTGTCAGTAAATCAAATTTCTGGAAATATTCCAACAGCTATTGGTGAATTGGAAACTTTGCAAAACTTATCTTTGGCACATAACAAATTGCAAGGTACTATTCCTAAATCAATTGGTGGCATGATGAGCATGCAATTCTTGGATCTTTCCCAAAATTATTTGTCTGGTGTGATTCCAAAGACCTTAGAATCACTTGCCCATCTTAAATATATCAATCTTTCTAACAATTTATTGTATGGAGAAATTCCAAACGGTGGGCCTTTTCAAGATTTTACAGCTGAATCTTTTATGAACAATGAAGGTCTTTGTGGCAAGCCCCAACTGAAAGTCCAGCCATGTAGAAAAGGAAACAAGCACATGTATGCTAAAAAGATGCTTTTGTTGAAATGCTTATTGCCGACCTTGTTGGCAGCCATTTTGGTTGTTTCATGCTTAGTCATTCTGAAGCGTAAAAGAGATCTTGTTAGTGACTCAACCAATAGGGAATTATTAAATTTGGGGGGACTAACTAGGATATCCTACTTTGAGCTTCTACAAGGAACAAATGGATTCGATGAGAGTAATCTTCTTGGTAGGGGGAGTTTTGGATCAGTATACAAAGTAATTCTTTCAAGTGGAATGATAGCTGCGGTTAAAATATTTAACTTAGACTTGGAAGAAGCATTCAGGAGCTTTGATACTGAATGTGCTGCTATATGCAATTTACGTCATCGCAATCTCGTTAAGATCATCAGCAGCTGCTCAAATGTTGATTTTAAATCTCTAATAATGGAATATATGCCAAAGGGGAGTCTTGACAAATGGTTGTACTCTCATAACTTTTGCTTAGATATCTTGCAGAGGTTGGATATAATGATTGATGTGGCATCTGCATTGGAGTATCTTCATCATGGTTCTTGTATACCGGTGGTCCATTGTGATGTAAAGCCGAGCAATATTCTGTTGGATGAAGATATGGTGGCCCATCTTAGTGATTTTGGTATTGCCAAACTATTAGGTGAAGGGCAATTGGAAATTTATACCAAGACTTTGGCTACAATTGGCTATATGGCACCAGAGTTTGGATCGAAAGGAGCTATTTCCATAAAAGGAGATGTATATAGTTATGGTATTTTGCTGATGGAAATGTTTACAAGGAAAAGGCCAACAGATGACATGTTTGTTGAGGGTCTAAGTTTGAAAGACTGGGTTTGCGAAGCAACACCTCATTCAATAATCAACATTCTAGATGATAATTTGTTGCAAGGAGATGGTCAAAATATTGGTAACATATTATCACATATGCCATCAATTTTCGAGTTGGCCTTAGATTGTTGCAATGATTTACCTGAGACAAGGATCAATATGACTGAAGTTGTGGTTTCATTGAAAAAAATCAAAATCATGTTTATGCAAATTGTTAGAGGCACCATTAGGTGA 3396 0.376 MPDMGQLRFSVILFSLHCFMASIACSMANIATDKYALLAFRSSITRDPYNLLANWSVSSSPCNWIGVSCNIRHGRVRSLNLSNMSLSGNVSPQLGNLSFLAELDLSSNNFDGLLPKEFVQLRRLKLLNLGLNKFDGEVPTWIESLFTLQHLILVNNSFSGYIPLSVSNLSRLETLDLGANFIEGPIPLAIGRLNNLKSLALGANRLSGNIPPTISNLTSLEFLSLAYNSLSGGFPKEIGDLSQLTILYLSHNQLSGPIPSKVFNNSVLEEIDLSYNNFNGALPSNICPEVSKLEVLLLQANNFTGKIPCVLQCKELEDLELSFNRFNKGYIPSDIGNLTNLQYLYLSNNSLEGEIPLFLFNMTSLREINLGFNHLHGNLPQEMCHQLPLLEIFDLIGNHFKGSFPKLLSNCTSLKGIYLALNSITGSIPKEIGNLVKLEEIELGDNYLSGSIPSNMFNISTLTRVHLGGNSLSGLFPSNMGSFLPNLYALELGDNELTGEIPKSISNASKLNELDLRLNKFSGLIPDALENLTRLGKLTLYSNDLNGRIPSNINKLQRLQYLDLSYNSLQGFIINELCQIRSLGFLSLANNMFSGSIPGCLGNLKMLQQLYLRSNKLISNIPYSVWTLRDILVIDLSSNALSGKIPLEISNLRALTLLDLSVNQISGNIPTAIGELETLQNLSLAHNKLQGTIPKSIGGMMSMQFLDLSQNYLSGVIPKTLESLAHLKYINLSNNLLYGEIPNGGPFQDFTAESFMNNEGLCGKPQLKVQPCRKGNKHMYAKKMLLLKCLLPTLLAAILVVSCLVILKRKRDLVSDSTNRELLNLGGLTRISYFELLQGTNGFDESNLLGRGSFGSVYKVILSSGMIAAVKIFNLDLEEAFRSFDTECAAICNLRHRNLVKIISSCSNVDFKSLIMEYMPKGSLDKWLYSHNFCLDILQRLDIMIDVASALEYLHHGSCIPVVHCDVKPSNILLDEDMVAHLSDFGIAKLLGEGQLEIYTKTLATIGYMAPEFGSKGAISIKGDVYSYGILLMEMFTRKRPTDDMFVEGLSLKDWVCEATPHSIINILDDNLLQGDGQNIGNILSHMPSIFELALDCCNDLPETRINMTEVVVSLKKIKIMFMQIVRGTIR 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0778 1131 Gene3D Ribonuclease Inhibitor 290 483 IPR032675 -
Dere10g0778 1131 Gene3D Phosphorylase Kinase; domain 1 806 918 - -
Dere10g0778 1131 SMART LRR_typ_2 97 120 IPR003591 -
Dere10g0778 1131 SMART LRR_typ_2 435 459 IPR003591 -
Dere10g0778 1131 SMART LRR_typ_2 724 748 IPR003591 -
Dere10g0778 1131 SMART LRR_typ_2 241 265 IPR003591 -
Dere10g0778 1131 SMART LRR_typ_2 362 386 IPR003591 -
Dere10g0778 1131 SMART LRR_typ_2 193 217 IPR003591 -
Dere10g0778 1131 SMART LRR_typ_2 604 628 IPR003591 -
Dere10g0778 1131 SMART LRR_typ_2 700 723 IPR003591 -
Dere10g0778 1131 SMART LRR_typ_2 484 508 IPR003591 -
Dere10g0778 1131 SMART LRR_typ_2 652 676 IPR003591 -
Dere10g0778 1131 SMART LRR_typ_2 338 360 IPR003591 -
Dere10g0778 1131 SMART LRR_typ_2 532 556 IPR003591 -
Dere10g0778 1131 SMART LRR_sd22_2 338 370 - -
Dere10g0778 1131 SMART LRR_sd22_2 241 273 - -
Dere10g0778 1131 SMART LRR_sd22_2 193 219 - -
Dere10g0778 1131 SMART LRR_sd22_2 652 678 - -
Dere10g0778 1131 SMART LRR_sd22_2 435 461 - -
Dere10g0778 1131 SMART LRR_sd22_2 604 623 - -
Dere10g0778 1131 SMART LRR_sd22_2 484 510 - -
Dere10g0778 1131 SMART LRR_sd22_2 556 579 - -
Dere10g0778 1131 SMART LRR_sd22_2 169 184 - -
Dere10g0778 1131 Pfam Leucine rich repeat 678 737 IPR001611 GO:0005515
Dere10g0778 1131 Pfam Leucine rich repeat 195 254 IPR001611 GO:0005515
Dere10g0778 1131 Pfam Leucine rich repeat 485 545 IPR001611 GO:0005515
Dere10g0778 1131 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 919 1127 - -
Dere10g0778 1131 Gene3D Ribonuclease Inhibitor 484 781 IPR032675 -
Dere10g0778 1131 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 538 1116 - -
Dere10g0778 1131 SUPERFAMILY Protein kinase-like (PK-like) 817 1122 IPR011009 -
Dere10g0778 1131 ProSiteProfiles Protein kinase domain profile. 843 1123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0778 1131 Gene3D Transferase(Phosphotransferase) domain 1 919 1125 - -
Dere10g0778 1131 SMART serkin_6 843 1122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0778 1131 Gene3D Ribonuclease Inhibitor 187 289 IPR032675 -
Dere10g0778 1131 Pfam Protein kinase domain 844 1112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0778 1131 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 484 776 - -
Dere10g0778 1131 Pfam Leucine Rich Repeat 558 578 IPR001611 GO:0005515
Dere10g0778 1131 Pfam Leucine Rich Repeat 340 357 IPR001611 GO:0005515
Dere10g0778 1131 SUPERFAMILY L domain-like 31 328 - -
Dere10g0778 1131 ProSitePatterns Protein kinases ATP-binding region signature. 849 871 IPR017441 GO:0005524
Dere10g0778 1131 FunFam Serine-threonine protein kinase plant-type 825 918 - -
Dere10g0778 1131 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 386 476 - -
Dere10g0778 1131 Gene3D Ribonuclease Inhibitor 30 186 IPR032675 -
Dere10g0778 1131 PRINTS Leucine-rich repeat signature 556 569 - -
Dere10g0778 1131 PRINTS Leucine-rich repeat signature 100 113 - -
Dere10g0778 1131 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Dere10g0778 1131 SUPERFAMILY L domain-like 507 766 - -
Dere10g0778 1131 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 30 181 - -
Dere10g0778 1131 SUPERFAMILY L domain-like 284 526 - -
Dere10g0778 1131 ProSitePatterns Serine/Threonine protein kinases active-site signature. 962 974 IPR008271 GO:0004672|GO:0006468
Dere10g0778 1131 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 182 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0778 Dere-ChrDere10 13946285 13965589 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0778 4 1119 Receptor kinase-like Gene Family AT5G46330 34.391 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dere10g0778 Pkinase 6.5e-45 CL0016