Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0776 ATGGGAAATCTTCGTTCCTCTGTTTTTGTGTTCTTACTTCAAGGCTTCGTGGCTTCCTTAGGCTGGAGTAAGACAAACATCATTACTGATAAATTCGCGCTTCTTGCTTTTAAATCTTCAGTCACCTTGGATCCATACAATCGCTTGGCTAATTGGTCAGTATCTTTTTCTCCATGCAATTGGGATGGTGTCACTTGCAGTACTCACCATGAAAGGGTCAGTTCTTTAAATCTTGGTGACATGGGTCTCACGGGCATCTTATCTCCACAACTAGGAAATCTCTCATTTCTTGTTGAACTTAATCTTGGTAACAACACTTTTAATGGTCAAGTACCAGAAGAGTTAGTTCAATTGCGCAGATTGAAACTACTCAACTTGAGCTTCAATGAATTTGATGGAAAAATACCAATATGGATAGGAGATTTATCTGCACTTCAGCACTTGAGTCTTCGCAATAATGGTTTTATTGGATTTATTCCACAATCTGTATCCAAACTATCAAAATTGGAGACCTTAGATTTGAGAATTAACTTTGTCGAGGGGACTATTCCACTTGAGATTGGAAGTCTTAAGTACTTGAAGGTTTTAGGACTCGGAAAGAACAAACTTTCAGGAAGCATACCGCACACAATTTCCAACTTATCTTCACTTGAATTAGTGAGTTTGTCTTATAACACTTTATCAGATATAAATGATTTCACTGGGGGGCTACCATCAGTTTGGCATCAATGCAAGGAATTGAAAGATTTGGCATTGTCTGGTAATGGATTCAACAGGGGACACATACCCAGTGACATCGGAAATTTGACCAACCTCCAATTCTTATACCTTGCTAACGACAACTTGGAAGGCTACTTGTCTCTAGCCTACAACATCTTCTCCGGGTCAATTCCAGAGTGCCTTGGGAATCTTTCATCATTGCGATCCTTGTACTTTGGCTCTAACAAATTGATTTCTCATATACCTTATTCTCTTTGGAGTCTCAAGGATATCATGGAGTTAGACTTATCCTCCAATACATTGAGTGGAAGAATTCCACTTGAGATTCTCAATTTAAGAGCACTTATATTGTTGGACTTGTCAACAAACGAAATTTCTGGAAACATTCCTACAACTATTGGTGGCTTGATAACTTTGCTAAAATTATCTTTGGCACATAACAAGTTGCAAGGGCCTATTCCTGAATCACTTGGCGGCATGACAAGCATGGAGTTCTTGGATATTTCCCAAAATTATTTGTCTGGTGTGATTCCAAAGACCTTAAAGTCACTTGCCCATCTTGAATATATCAATCTTTCCTACAATTTATTGTATGGTGAAATTCCAAATGGCGGGCCTTTTCAAAATTTTACAGCTGAATCGTTTATGATGAATGAAAGCCTTTGTGGAAATCCCCAACTACATGTCCAGCCATGCAGAAATGGAAAGAATAAAGAGATGATTTTGTTGAAATGCTTCTTGCCTATCATGTTTGCAGTCATTTTGGTTGTTTCATGCATAGTCTTTCTAAGGTGTAAAAGAGATTATGTTAGTGACCATTCAACCAACAGGGATTCATTGAATTTGGAGACACCAATTAGGATATCCTACTATGAACTTCTACGGGGAACAAATGGATTTGATGAGAGTAATCTTCTTGGCAGGGGGAGTTTTGGATCAGTATACAAAGGAATTCTCACAAGTGGAATGACAGTTTCTGTTAAAATATTTAACTTAGACTTGGAAGAAACATTAAGGAGCTTTGACATTGAATGTGCTACCATGTTGGATATAATGATTGATGTGGCTTCTGCGTTGGAGTATCTTCATCATGGTTCTTCTATAACAGTGGTCCATTGTGATGTGAAACCGAGCAATGTTTTGTTGGATGAAGATATGGTGGCCCATCTTAGTGATTTTGACATTGCAAAACTATTAGGTGAAGGGCAGTTGGAAATTTACACCAAGACTTTGGCTACAATTGGCTATATGGCACCAGAGTATGGATCGAATGGAGCTATTTCTGTGAAAGGAGATGTGTATAGTTATGGTATTTTGCTCATGTTCACAAGGAAGAAGCCAACAGATGAAATGTTTGTTCAAGGTTTGAGTCTGAAAGACTGGGTTAGCAAATCAACGCCACATTGA 2127 0.3832 MGNLRSSVFVFLLQGFVASLGWSKTNIITDKFALLAFKSSVTLDPYNRLANWSVSFSPCNWDGVTCSTHHERVSSLNLGDMGLTGILSPQLGNLSFLVELNLGNNTFNGQVPEELVQLRRLKLLNLSFNEFDGKIPIWIGDLSALQHLSLRNNGFIGFIPQSVSKLSKLETLDLRINFVEGTIPLEIGSLKYLKVLGLGKNKLSGSIPHTISNLSSLELVSLSYNTLSDINDFTGGLPSVWHQCKELKDLALSGNGFNRGHIPSDIGNLTNLQFLYLANDNLEGYLSLAYNIFSGSIPECLGNLSSLRSLYFGSNKLISHIPYSLWSLKDIMELDLSSNTLSGRIPLEILNLRALILLDLSTNEISGNIPTTIGGLITLLKLSLAHNKLQGPIPESLGGMTSMEFLDISQNYLSGVIPKTLKSLAHLEYINLSYNLLYGEIPNGGPFQNFTAESFMMNESLCGNPQLHVQPCRNGKNKEMILLKCFLPIMFAVILVVSCIVFLRCKRDYVSDHSTNRDSLNLETPIRISYYELLRGTNGFDESNLLGRGSFGSVYKGILTSGMTVSVKIFNLDLEETLRSFDIECATMLDIMIDVASALEYLHHGSSITVVHCDVKPSNVLLDEDMVAHLSDFDIAKLLGEGQLEIYTKTLATIGYMAPEYGSNGAISVKGDVYSYGILLMFTRKKPTDEMFVQGLSLKDWVSKSTPH 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0776 708 Gene3D Ribonuclease Inhibitor 141 231 IPR032675 -
Dere10g0776 708 SUPERFAMILY Protein kinase-like (PK-like) 518 693 IPR011009 -
Dere10g0776 708 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Dere10g0776 708 Gene3D Ribonuclease Inhibitor 232 481 IPR032675 -
Dere10g0776 708 Gene3D Ribonuclease Inhibitor 29 140 IPR032675 -
Dere10g0776 708 SUPERFAMILY L domain-like 231 466 - -
Dere10g0776 708 Pfam Protein kinase domain 581 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0776 708 ProSiteProfiles Protein kinase domain profile. 436 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0776 708 Pfam Leucine Rich Repeat 145 166 IPR001611 GO:0005515
Dere10g0776 708 PANTHER UNNAMED PRODUCT 87 691 - -
Dere10g0776 708 SMART serkin_6 540 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0776 708 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 231 476 - -
Dere10g0776 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Dere10g0776 708 SMART LRR_typ_2 142 166 IPR003591 -
Dere10g0776 708 SMART LRR_typ_2 269 295 IPR003591 -
Dere10g0776 708 SMART LRR_typ_2 424 448 IPR003591 -
Dere10g0776 708 SMART LRR_typ_2 214 237 IPR003591 -
Dere10g0776 708 SMART LRR_typ_2 94 118 IPR003591 -
Dere10g0776 708 SMART LRR_typ_2 352 376 IPR003591 -
Dere10g0776 708 SMART LRR_typ_2 304 328 IPR003591 -
Dere10g0776 708 SMART LRR_typ_2 400 423 IPR003591 -
Dere10g0776 708 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 29 137 - -
Dere10g0776 708 Gene3D Phosphorylase Kinase; domain 1 504 587 - -
Dere10g0776 708 FunFam Piriformospora indica-insensitive protein 2 138 230 - -
Dere10g0776 708 Pfam Leucine rich repeat 379 437 IPR001611 GO:0005515
Dere10g0776 708 SUPERFAMILY L domain-like 29 285 - -
Dere10g0776 708 Gene3D Transferase(Phosphotransferase) domain 1 588 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0776 Dere-ChrDere10 13911566 13921488 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0776 29 708 Receptor kinase-like Gene Family AT3G47570 31.373 4.02e-117 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dere10g0776 Pkinase 4e-21 CL0016