Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0770 ATGGAGGCCTCTCATCATATAACCAACATTTTCTTGTTTGTTATACTACCTGGTGCGGCCTCAATAACCTTTAGCTACGAGCAGTTTTCTGACAAAAATTATAAAAATTTGAAGTTTGAAGGAGATGTTTATCAGGAAAATGAGGTCCTCCAGCTCACCAGGTATCAGAAAGACAGCGCTGGGAGAGTAACATATGACAAACAGCTACAACTTTGGGACATGGAGACAAGAAAACTTGCAGACTTCACTACTCGTTTCGCCTTCATCATCAATGCCCCAAATAAAACGCTTGATGGGGATGGCATCACATTCTTCCTAGCACACCCCAATTTTCCACTTCCGGTGCCACCAGATGGCACCGGTATTGGTCTCGTGGGTCGTAGGCAAATGGAGGATCCAAATTACGGAAATGAGCATCCATTTGTGGCAGTGGAGTTTGATACCTTTCCAAATCAGGATGATCCACCATATGATCATGTAGGTGTCGACATCCAAAAAATGTGGACTCCCTATACAACACAATGGTACACTATTAATGATGGCAGAAAGTATGATGCCAAAATTAGCTACAATTCTAGCTCATACGAGTTATATGTCATCTTTACTGGATATAAGGATAATTTCACAATTCAACAAAACTATTCCCATAAAATTGATTTGAGAGATGTCCTACCATCACAGGTTCAGTTTGGTTTCTCTTCGGCTACAGGATTGTTTTTTGAGATGCATACACTATGCTCATGGTCCTTTAATTCAAGTGAAGTGTTGAGAGTAAAGAAGAGTGAAAGCAAGAAGAGGCTGATCAAGGGGCTGAGCGTTGGATTAGGTGTATTAATTGGCGGGTTATTCTTAGCTTGGCTTGTGATATGGAAGCTGAATTTTAGGGTAAAGAAAGAAGACTACGATCTTTCCTTGGACAATGATTTTGCAAGAAGTACTGGACCAAAGAAGTTTTCCTATAATGAACTAGCTCGAGCGACAAACAACTTTGCAGAAGAACAAAAGCTTGGAGAGGGAGGTTTTGGTGGTGTCTACAAAGGATTTATAAGAGAATTAAACACCTATGTCGCAGTTAAAAAGGTGTCACAAGGATCTAGACAGGGAGTGAAGGAGTATGCCTCTGAAGTAAAGATCATTAGTCAACTAAGGCACAAGAATTTGGTGCAACTCATTGGCTGGTGCCACCAGAGGAATGATTTTCTACTCATCTATGAGTTCATGTCAAATGGCAGCTTAGCCTACCATCTGTTTCGAAGCAGAAACCTCTTGACATGGCCGTCCAGATACATTATTGCTCAAGGGCTAGCATCAGCAATATTATACCTGCATGAAGAGTGGGAGCAATGTGTGGTGCATAGGGACATAAAATCAAGCAATGTTTTGTTAGATTCAAATTTCAATGCTAAGCTTGGAGATTTTGGGTTAGCAAGACTCGTAGAACACGGGCAAGGGTCAGAAACAACAATTGTAGCCGGAACAAAGGGATACATGGCTCCTGAATGTTCAGCCATAAGCAAGGCAACTACAGAGTCTGATGTGTACAGTTTTGGAGTCGTTGCTTTGGAGATAGCCTGTGGGAGAAAACCAATTGACCTCACTGCCTCGGAAAAACAGGTCATTATGGTGGAATGGGTATGGGAACAATATGGCATGGGTAAACTTCTCGAAGCAGCTGATCGTAGGTTTGATGGAGATTTTGACGAGCAAGAATTGGAAAGGTTAATGATGATTGGCCTTTGGTGTGCTCACCCAGATTACACTTTGAGGCCTACAATTAGACAAGCCGTTAATGTGCTTAATTTTGAAGCTCCGCTGCCCAATCTCCCACCAAAGATGCCCAAACCCATCTATGTTGACCCATCTTTTTCTGAACTTCATTCTTCAAACTTCGCGTCCCCTAATGCTAGTTCTCTTGGCATCCAAACACAGCCTTCAACCAGTAGCTCACACACTGCTTCCTCACAATCATCTGCATCAGGCACACTTCTACCCACGAAAAGGGTCTACAAGTAA 2013 0.4228 MEASHHITNIFLFVILPGAASITFSYEQFSDKNYKNLKFEGDVYQENEVLQLTRYQKDSAGRVTYDKQLQLWDMETRKLADFTTRFAFIINAPNKTLDGDGITFFLAHPNFPLPVPPDGTGIGLVGRRQMEDPNYGNEHPFVAVEFDTFPNQDDPPYDHVGVDIQKMWTPYTTQWYTINDGRKYDAKISYNSSSYELYVIFTGYKDNFTIQQNYSHKIDLRDVLPSQVQFGFSSATGLFFEMHTLCSWSFNSSEVLRVKKSESKKRLIKGLSVGLGVLIGGLFLAWLVIWKLNFRVKKEDYDLSLDNDFARSTGPKKFSYNELARATNNFAEEQKLGEGGFGGVYKGFIRELNTYVAVKKVSQGSRQGVKEYASEVKIISQLRHKNLVQLIGWCHQRNDFLLIYEFMSNGSLAYHLFRSRNLLTWPSRYIIAQGLASAILYLHEEWEQCVVHRDIKSSNVLLDSNFNAKLGDFGLARLVEHGQGSETTIVAGTKGYMAPECSAISKATTESDVYSFGVVALEIACGRKPIDLTASEKQVIMVEWVWEQYGMGKLLEAADRRFDGDFDEQELERLMMIGLWCAHPDYTLRPTIRQAVNVLNFEAPLPNLPPKMPKPIYVDPSFSELHSSNFASPNASSLGIQTQPSTSSSHTASSQSSASGTLLPTKRVYK 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0770 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Dere10g0770 670 FunFam L-type lectin-domain containing receptor kinase IX.1 315 406 - -
Dere10g0770 670 Pfam Protein kinase domain 331 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0770 670 CDD lectin_legume_LecRK_Arcelin_ConA 24 253 IPR001220 GO:0030246
Dere10g0770 670 Pfam Legume lectin domain 22 262 IPR001220 GO:0030246
Dere10g0770 670 PANTHER - 45 609 - -
Dere10g0770 670 Gene3D Transferase(Phosphotransferase) domain 1 407 620 - -
Dere10g0770 670 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 255 IPR013320 -
Dere10g0770 670 Gene3D Phosphorylase Kinase; domain 1 315 406 - -
Dere10g0770 670 SMART serkin_6 330 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0770 670 MobiDBLite consensus disorder prediction 633 670 - -
Dere10g0770 670 FunFam Lectin-domain containing receptor kinase A4.3 407 619 - -
Dere10g0770 670 ProSitePatterns Legume lectins beta-chain signature. 142 148 IPR019825 -
Dere10g0770 670 CDD STKc_IRAK 336 600 - -
Dere10g0770 670 ProSiteProfiles Protein kinase domain profile. 330 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0770 670 ProSitePatterns Protein kinases ATP-binding region signature. 336 360 IPR017441 GO:0005524
Dere10g0770 670 MobiDBLite consensus disorder prediction 633 663 - -
Dere10g0770 670 SUPERFAMILY Protein kinase-like (PK-like) 314 624 IPR011009 -
Dere10g0770 670 Gene3D - 19 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0770 Dere-ChrDere10 13746672 13749564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0770 10 617 Receptor kinase-like Gene Family AT5G10530 46.400 2.11e-174 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere10g0770 Pkinase 1.8e-49 CL0016