Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0762 ATGTTTCTTGGCCAAATCAGAAATTTTGATTTCCCTTACGAGTTCTTGATGATGATGTTGGTAACTTTCTTCTTCTTGATTATCCCGCAAGCATTCTCCTTATCATTTAACTTCCCTAGTTTCGATCCCAATGATAAGAATATAACATACGAGGGAGACGCTAACCCAGCACCTCCGTCCATCCGGTTAACATACCAGACAGACAATCACACGCCAAGCAGTGCCGGTCGAGCCACGTATCACCAACCGATGCACCTGTGGGACAAAGCCACTGGGAACCTCACAAACTTCACCACCCATTTTACCTTTGAGATTTGTACAAACTTCTCTGAATATGCAGATGGGATTGCCTTCTTCTTAGCCCCTAATGATTCAAAGCTTCCCTATCTCACACAAGGAGGTTCTATGGGTCTGACTCATGATGAACAAATCCTAGATTCAACAGGCAATCCATTTGTTGCTGTGGAGTTTGATATCTATTCGAATGAGTGGGATCCTCCCAAGGAACATGTGGGTGTCAATATCAATTCTATGATATCCGTTAAGAATTTGACATGGTTTGCTGATATCGAAGGAGGGAGATGCAATGAGGCTTTCATCAGTTACAATTCAAGAACCCATAATTTAAGCATTTTGTTCACAGGCTTTGTTAATGGCAACATTGTGCAACAACATCTTTGTGACATAGTTGATCTGAGAGAGCATATGCCTGAATGGGTTACTTTTGGCTTCTCAGCTGCAACAGGAGTTAAATCCGCTCTATTTAGGATCAATTCATGGAATTTCACCTCAGAGGAGTTCACAGACATAGCTCTCAGTCCAAGCCCGAATCTAAGCTTGAGCCCGAGCTTTAGCCCGAGCTTTAGCCCGAGGAGTAAAAATTCCATGACAGTATTTGCAGTGGGATTGGGGGTTGGAGGGTCTGTTTTAATTTGTGGGTTGGGTTTGGTTCTGCTATGCATGTGGAAGAAGAAGAAAGAGAAAATGGAAGAGGAAGACCGTGAGTTAGATGAGTACATGAGTGAGGATTTTGAAAGAAGAACAGGACCCAAGAAGTACTTATATGCTGAACTAGCAAGTGCGGCTAATTATTTCAAAGATGAGCAGAAGCTAGGACAAGGAGGATTTGGGGGTGTTTATAGAGGTTTCCTCAAAGATTCAAACTCCTATGTTGCCATAAAAAGAGTATCAAAGGGTTCTAAACAGGGAATAAAGGAGTTTGCTTCAGAAGTAAGAATTATCAGTCAACTAAGGCACCGAAATTTGGTGCAGCTAATAGGATGGTGTCATGAGAGAAAAGAACTATTGCTAGTTTATGAGTATATGCCAAATGGAAGCTTAGATTATCATCTCTTCAAGGACCAAAGGTTGCTGAAATGGGCAGTACGATTTAAGATAGCTCAAGGCTTGGCCTCTGCATTGCTATACCTGCACGAAGAATGGGAACAATGCATCGTTCACAGAGACATAAAATCAAGCAACATCATGCTAGACTCAAACTTCAATGCAAAACTCGGAGATTTTGGGTTAGCAAGGCTCGTAGACCACGCCAAAGGTGCACAAACTACAGCTTTGGCTGGTACTATGGGCTACATGGCTCCTGAATGTGTTATTACTGGTAGAGCTAGTAAGGAATCAGATGTGTATGGTTTTGGAGTTGTTGCTTTGGAGATAGCATGTGGAAGAAAACCCATCAACCCCAACGCTCCAGAAAATGAAATAAACATCGTGAATTGGGTATGGGGACTCTATGGAAGTGGGAGAATTCTTGAAGCAGTTGATCCAAGACTAAATGGAGATTTTGACCTGGAGCAAATCAAATGCTTGACGATTGTAGGGCTTTGGTGTACTCATCCTAGCCATAATAATAGGCCTTCAATAAGGCAAGCAATTCATGTGCTTAATTTTGAAGCTCCATTCCCTAATCTTCCATCATGTTTACCCGTACCAACATATATTGAACTTCCAGTGAGGTCATCATCTTCAGCTCCATCTAGCTCCAATGTTTCAGAGGTAGGACAAAACCGGAACACAAGCTTTAGTTCCAACACACACTCATCTGGGTTTACTACAACTTCTGATGACGTTTTGCCCTCTGTGTCACTTCTGTTCTCGCGTTACAGTTAA 2127 0.4222 MFLGQIRNFDFPYEFLMMMLVTFFFLIIPQAFSLSFNFPSFDPNDKNITYEGDANPAPPSIRLTYQTDNHTPSSAGRATYHQPMHLWDKATGNLTNFTTHFTFEICTNFSEYADGIAFFLAPNDSKLPYLTQGGSMGLTHDEQILDSTGNPFVAVEFDIYSNEWDPPKEHVGVNINSMISVKNLTWFADIEGGRCNEAFISYNSRTHNLSILFTGFVNGNIVQQHLCDIVDLREHMPEWVTFGFSAATGVKSALFRINSWNFTSEEFTDIALSPSPNLSLSPSFSPSFSPRSKNSMTVFAVGLGVGGSVLICGLGLVLLCMWKKKKEKMEEEDRELDEYMSEDFERRTGPKKYLYAELASAANYFKDEQKLGQGGFGGVYRGFLKDSNSYVAIKRVSKGSKQGIKEFASEVRIISQLRHRNLVQLIGWCHERKELLLVYEYMPNGSLDYHLFKDQRLLKWAVRFKIAQGLASALLYLHEEWEQCIVHRDIKSSNIMLDSNFNAKLGDFGLARLVDHAKGAQTTALAGTMGYMAPECVITGRASKESDVYGFGVVALEIACGRKPINPNAPENEINIVNWVWGLYGSGRILEAVDPRLNGDFDLEQIKCLTIVGLWCTHPSHNNRPSIRQAIHVLNFEAPFPNLPSCLPVPTYIELPVRSSSSAPSSSNVSEVGQNRNTSFSSNTHSSGFTTTSDDVLPSVSLLFSRYS 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0762 708 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 266 IPR013320 -
Dere10g0762 708 FunFam Lectin-domain containing receptor kinase A4.3 442 654 - -
Dere10g0762 708 Gene3D Transferase(Phosphotransferase) domain 1 442 654 - -
Dere10g0762 708 PANTHER - 55 644 - -
Dere10g0762 708 Gene3D Phosphorylase Kinase; domain 1 350 441 - -
Dere10g0762 708 Pfam Legume lectin domain 33 268 IPR001220 GO:0030246
Dere10g0762 708 SMART serkin_6 365 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0762 708 FunFam L-type lectin-domain containing receptor kinase IX.1 32 270 - -
Dere10g0762 708 FunFam L-type lectin-domain containing receptor kinase IX.1 350 441 - -
Dere10g0762 708 SUPERFAMILY Protein kinase-like (PK-like) 349 655 IPR011009 -
Dere10g0762 708 Coils Coil 322 342 - -
Dere10g0762 708 ProSiteProfiles Protein kinase domain profile. 365 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0762 708 CDD lectin_legume_LecRK_Arcelin_ConA 34 264 IPR001220 GO:0030246
Dere10g0762 708 CDD STKc_IRAK 371 635 - -
Dere10g0762 708 Pfam Protein kinase domain 365 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0762 708 ProSitePatterns Protein kinases ATP-binding region signature. 371 394 IPR017441 GO:0005524
Dere10g0762 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Dere10g0762 708 Gene3D - 32 271 - -
Dere10g0762 708 MobiDBLite consensus disorder prediction 662 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0762 Dere-ChrDere10 13504913 13507039 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0762 19 652 Receptor kinase-like Gene Family AT5G10530 48.062 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere10g0762 Pkinase 4.5e-51 CL0016