Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0759 ATGTTTCTTGGCCAAATCAGAAATTTTGATTTCCCTTATGAGTTCTTGATGATGATGTTGGTAACTGTCTTCTTCTTGATTATCCCGCAAGCATTCTCGTTATCATTTAACTTCCCTAGTTTCAATCCCAATGATAATATAACATGCGAGGGAAAAGCTTACCTAGCACCACCATCCATCCGGTTAACAAACCAGACAGACAATTACACGACAAACAGTGCCGGTCGAGCCACGTATCACCAACCGATGCACCTGTGGGACAAAGCCACTGGGAACCTCACGGACTTCACCACCCATTTTACCTTTGTGATTAGTTCAAACTCCACTGAATATGCAGATGGGATTGCCTTCTTCTTAGCCCCTAATGATTCAAAGCTTCCCTATCTCACACAAGGAGGTTCTATGGGTCTGACTAGTGATGAACAAATCAAAGATTCAACAGGCAATCCATTTGTTGCTGTGGAGTTTGATATCTATCCGAATGAGTGGGATCCTCCCAAGGAACATGTGGGTGTCAATATCAATTCTATGAGATCCGTTAAGAATTTGACATGGTTTGCTGATATCAAAGGAGGGAGAAGAAATGAGGCTTCCATCACTTACAATTCAAGTACTCATAACTTAAGCATTCTGTTCAGTGATTTTCGTAATGACACCACTGTGCCTCAACATCTTCATTACCAGGTTGATCTGAGAGAGTATCTTCCTGAATGGGTTACTTTTGGCTTCTCAGCTGCAACAGGATCCAAATTCGCTCTATTTAAGATCAATTCATGGAATTTCACCTCAGAGGAGTTCACAGACATAGCTCTCAGTCCAAGCCCGAATCCAAGCTTGAGCCCGAGCTTTAGCCCGAGGAGTAAAAATTCCATGACAGTATTTGCAGTGGGATTGGGGGTTGGAGGGTCTGTTTTAATTTGTGGGTTGGGTTTGGTTCTGCTATGCATGTGGAAGAAGAAGAAAGAGAAAATGGAAGAGGAAGACCGTGAGTTAGATGAGTACATGAGTGAGGATTTTGAAAGAAGAACAGGACCCAAGAAGTACTTATATGCTGAACTAGCAAGTGCGGCAAATTATTTCAAAGATGAGCAGAAGCTAGGACAAGGAGGATTTGGGGGTGTTTATAGAGGTTTTCTCAAAGATTCAAACTCCTATGTTGCCATAAAAAGAGTATCAAAGGGTTCTAAACAAGGAATAAAGGAGTTTGCTTCAGAAGTAAGAATTATCAGTCAACTAAGGCACCGAAATTTGGTGCAGCTAATAGGATGGTGTCATGAGAGAACAGAACTATTGCTAGTTTATGAGTATATGCCAAATGGAAGCTTAGATTATCATCTCTTCGAGGACCAAAGGTTGCTGAAATGGGCAGTGCGATTTAAGATAGCTCAAGGCTTGGCCTCTGCATTGCTATACCTGCACGAAGAATGGGAACAATGCATCGTTCACAGAGACATAAAATCAAGCAACATCATGCTAGACTCAAACTTCAATGCAAAACTCGGAGATTTTGGGTTAGCAAGGCTTGTAGACCATGCAAAAGGTGCACAAACTACAGCTTTGGCTGGTACTATGGGCTACATGGCTCCTGAATGTTTTATTACTGGTAGAGCTAGTAAGGAATCAGATGTGTATAGTTTTGGAGTTGTTGCTTTGGAGATAGCATGTGGAAGAAAACCCATCAACCCCAACGCTCCAGAAAATGAAATAAACATAGTGAATTGGCTATGGGGACTCTATGGAAGTGGGAGAATTCTTGAAGCAGTTGATCCAAGACTAAATGGAGATTTTGACCTGGATCAAATCAAATGCTTGATGATTGTAGGGCTTTGGTGTACTCATCCTAGTCATAATAATAGGCCTTCAATAAGGCAAGCAATTCATGTGCTTAATTTTGAAGCTCCATTCCCTAGTCTTCCATCATGTTTACCTGTACCAACATATATTGAACTTCCAGTGAAGTCATCATCTTCAGCTCCATCCAGCTCCAATGTTTCAGAGGTAGGACAAAACCGGAACACAAGCTTTAGTTCCAACACACACTCATCTGGTTTTACTACAACTTCCGATGATGTTTCGCCTTCTGTGTCACTTCTGCTCTCGCGCTACAGTTAA 2112 0.4171 MFLGQIRNFDFPYEFLMMMLVTVFFLIIPQAFSLSFNFPSFNPNDNITCEGKAYLAPPSIRLTNQTDNYTTNSAGRATYHQPMHLWDKATGNLTDFTTHFTFVISSNSTEYADGIAFFLAPNDSKLPYLTQGGSMGLTSDEQIKDSTGNPFVAVEFDIYPNEWDPPKEHVGVNINSMRSVKNLTWFADIKGGRRNEASITYNSSTHNLSILFSDFRNDTTVPQHLHYQVDLREYLPEWVTFGFSAATGSKFALFKINSWNFTSEEFTDIALSPSPNPSLSPSFSPRSKNSMTVFAVGLGVGGSVLICGLGLVLLCMWKKKKEKMEEEDRELDEYMSEDFERRTGPKKYLYAELASAANYFKDEQKLGQGGFGGVYRGFLKDSNSYVAIKRVSKGSKQGIKEFASEVRIISQLRHRNLVQLIGWCHERTELLLVYEYMPNGSLDYHLFEDQRLLKWAVRFKIAQGLASALLYLHEEWEQCIVHRDIKSSNIMLDSNFNAKLGDFGLARLVDHAKGAQTTALAGTMGYMAPECFITGRASKESDVYSFGVVALEIACGRKPINPNAPENEINIVNWLWGLYGSGRILEAVDPRLNGDFDLDQIKCLMIVGLWCTHPSHNNRPSIRQAIHVLNFEAPFPSLPSCLPVPTYIELPVKSSSSAPSSSNVSEVGQNRNTSFSSNTHSSGFTTTSDDVSPSVSLLLSRYS 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0759 703 CDD lectin_legume_LecRK_Arcelin_ConA 34 263 IPR001220 GO:0030246
Dere10g0759 703 Pfam Legume lectin domain 33 267 IPR001220 GO:0030246
Dere10g0759 703 CDD STKc_IRAK 366 630 - -
Dere10g0759 703 PANTHER - 62 639 - -
Dere10g0759 703 Gene3D Phosphorylase Kinase; domain 1 345 436 - -
Dere10g0759 703 SMART serkin_6 360 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0759 703 Coils Coil 317 337 - -
Dere10g0759 703 Pfam Protein kinase domain 360 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0759 703 FunFam L-type lectin-domain containing receptor kinase IX.1 345 436 - -
Dere10g0759 703 MobiDBLite consensus disorder prediction 657 692 - -
Dere10g0759 703 ProSiteProfiles Protein kinase domain profile. 360 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0759 703 FunFam Lectin-domain containing receptor kinase A4.3 437 649 - -
Dere10g0759 703 ProSitePatterns Protein kinases ATP-binding region signature. 366 389 IPR017441 GO:0005524
Dere10g0759 703 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 265 IPR013320 -
Dere10g0759 703 ProSitePatterns Legume lectins alpha-chain signature. 235 244 IPR000985 -
Dere10g0759 703 Gene3D Transferase(Phosphotransferase) domain 1 437 649 - -
Dere10g0759 703 FunFam L-type lectin-domain containing receptor kinase IX.1 32 269 - -
Dere10g0759 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Dere10g0759 703 SUPERFAMILY Protein kinase-like (PK-like) 344 648 IPR011009 -
Dere10g0759 703 Gene3D - 32 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0759 Dere-ChrDere10 13460602 13462713 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0759 19 647 Receptor kinase-like Gene Family AT5G10530 48.986 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere10g0759 Pkinase 8.9e-51 CL0016