Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0754 ATGATATCATATCATCTTCCAATTAGCAAAACGAAGCCTCAAAACAGCCCGAAGATGTTGCAGTTTGCTATTCATCGAGTGAAGAAGTTGAAGAATTTGACACCCCAGATCTTAGCTTTGGGAAGTTCCCAGTTCTCGATTGCTGCTGAGCCATCTTCCAGGAAGCATAATCCGCCGAGGGTTCCAAATCTTATAGGGGGCAGTTTTGTTGACTCAAAATCATCTACTGTCATCGATGTTATAAACCCTGCAACACAAGAAGTTGTGTCACAAGTTCCTTTGACTACAAATGATGAGTTTAAGGCTGCCGTATCTGCAGCTAAGAGGGCTTTTGCATTGTGGCGTAACACTCCAATTACAACACGTCAACGTGTTATGATGAAGCTCCAGGAGCTTATACGCAGAGATATGGATAAACTCGCTCTGAATATAACCACTGAACAAGGAAAGACATTGAAGGATGCACAAGGAGATGTATTTCGTGGCTTAGAGGTGGTGGAACATGCTTGCGGGATGGCAACATTACAAATGGGGGAGTATGTTTCTAATGTATCACATGGAATTGATACTTACAGCATTAGAGAACCACTTGGTGTTTGTGCTGGGATATGTCCTTTCAACTTTCCTGCAATGATTCCTTTGTGGATGTTCCCAGTGGCAGTTACTTGTGGTAATACCTTTGTTCTAAAGCCATCAGAAAAAGATCCAGGTGCCTCTATAATGCTTGCAGAATTAGCATTTGAGGCTGGTTTGCCTGAGGGCGTCTTAAATATTGTTCACGGAACCCACGATATTGTGAATGCTATTTGTGATGATGACAACATCAAAGCTGTATCTTTTGTTGGTTCAAATGTTGCTGGTATGCATATATATTCAAGAGCATCAGCTAAAGGGAAACGTGTCCAATCGAATATGGGAGCAAAAAATCACGCAATTGTCCTGCCTGATGCGAATGTTGATACTACTATAAATGCTTTAGTTGCTGCTGGTTTTGGTGCTGCAGGACAAAGGTGCATGGCACTCAGCACAGTTGTCTTTGTTGGAGGATCAAAACCATGGGAAACTATATTAGTGCAGCGTGCTAATGCCCTTAAAGTAAGTGCTGGAACTGATCCTGATGCAGACCTTGGTCCAGTCATCAGCAAACAGGCAAAGGAGCGCATACACAGATTAATTCAATCTGGTGTTGAAAGTGGGGCCAGATTGCTGCTTGATGGAAGAAGTGTAGTGGTCCCAGGCTATGAATCTGGCAATTTTATTGGCCCAACCATCTTATCAGATGTCACTGCAGACATGGAGTGCTACAAGGAGGAAATTTTTGGCCCAGTTCTTCTTTTCATGGAGGCTGACAGCTTGGAAGAGGCCATAAATATTGTTAACAGAAACAAGTACGGGAATGGTGCTTCTATATTTACTACATCTGGGGCTGCCGCGAGGAAATTTCAGACAGAGATTGAAGCTGGACAGGTGGGCATCAATGTTCCCATTCCAGTTCCTTTGCCCTTTTTCTCATTTACTGGCAACAAGGCATCATTTGCAGGCGATCTCAATTTCTATGGCAAGGCTGGGGTTAACTTTTATACTCAGATCAAAACAGTAACTCAGCAATGGAAGGATTCTGCTGGTGGCAGCAAAATTAACATGGCAATGCCAACCTCTCAAAAATCTTAA 1671 0.4297 MISYHLPISKTKPQNSPKMLQFAIHRVKKLKNLTPQILALGSSQFSIAAEPSSRKHNPPRVPNLIGGSFVDSKSSTVIDVINPATQEVVSQVPLTTNDEFKAAVSAAKRAFALWRNTPITTRQRVMMKLQELIRRDMDKLALNITTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAFEAGLPEGVLNIVHGTHDIVNAICDDDNIKAVSFVGSNVAGMHIYSRASAKGKRVQSNMGAKNHAIVLPDANVDTTINALVAAGFGAAGQRCMALSTVVFVGGSKPWETILVQRANALKVSAGTDPDADLGPVISKQAKERIHRLIQSGVESGARLLLDGRSVVVPGYESGNFIGPTILSDVTADMECYKEEIFGPVLLFMEADSLEEAINIVNRNKYGNGASIFTTSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTVTQQWKDSAGGSKINMAMPTSQKS 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0754 556 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 65 312 - -
Dere10g0754 556 Pfam Aldehyde dehydrogenase family 69 533 IPR015590 GO:0016491
Dere10g0754 556 SUPERFAMILY ALDH-like 57 538 IPR016161 GO:0016491
Dere10g0754 556 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 331 342 IPR016160 GO:0016491
Dere10g0754 556 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 63 537 IPR010061 GO:0004491
Dere10g0754 556 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 514 IPR016162 GO:0016491
Dere10g0754 556 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 306 506 IPR016163 GO:0016620
Dere10g0754 556 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 306 506 - -
Dere10g0754 556 CDD ALDH_F6_MMSDH 61 537 IPR010061 GO:0004491
Dere10g0754 556 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 26 553 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0754 Dere-ChrDere10 13408408 13415830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0754 30 521 Aldehyde Dehydrogenase Gene Family AT2G14170 81.707 0.0 835