Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0733 ATGGAGGTGCCGTCAGCAATGCTGGACTGGGGAGAATCCTCAATGAAAATTGAAGTTAGGAGGATGTTGGTAGGGAAGGCTAATGACAGGGAAGCAGAGCTACAATGGATGGATGGGGATGGAGAGAAAAGAGCTCAGAAGAAGGGAGTTTCAGTACTAGTAATGGAAGCGCGTGATGGAAGGACAGGGCGCGTAGTGGGACAGAGATATGTTGATCATTTGGCGGAAAAAGAAATTAAGAAGGCCAGTGGATGGGCTGACACTAATTATGGGCTGAAGTCTAATGTTGGTTTTGGGCTGAGTGAAAAGTGGGAGGGCCGGGAGACATGGAAATTATCTCCGTCTGGATACATTGTCGGATTGTCGGGTGATGAGCATGTAGAGGAAGGCTTGATAGCGATATTTCAAAAGGAGAGAATCTTATCAGAAGTGATGCAGAGTTTGGGGAGGATAAATTTGAAGAGAAGACATAAAGAGGGAGAAGAGGAAGAATGGAAGTTAAAAAAGGCAAAAGTTGCCATGGAGGCATTGAAGGATAATCCTAATATTGGTACAGTGTTTGACGGTGCTGGGGAAAAGATTACTGCAAGTTCGAGGTTCACAGAAAAGGCAATTGCTTTGAGAAATGCTTTGATGATGATAAGGGAAAGGTATACTACTGTAAGTTTTATACCCGAGATAGGCCGTCTTGATAAACTTGAAGTCTTGGCTTTAGAACACAACCATTTGAGTGGACCTATACCTTCCAATATTTTCAACATTTCAACGTTGACACGAGTGTTCCTATCAGCTAATTCCCTCTCTGGCCTTCTCCCATCCAATATCGGAAGTGGCCTTCCTAACCTGAAGGAATTACAACTGGAGTACAATGAAATTACAGGACAAATTCCAAATAGCATATCCAATGCTTCTAATCTCAATTACTTTAGGTGGGGGTGGAATAATTTTAGCGGATTCATACCAAATGCACTTGGAAATCTAACCATGTTGATCCAAGTAAGTTTATTTTCAAATTATTTGAATGGGCCCATTCCTACTACGCTGAACAAATTGCATGGTCTTCAATATTTGGATTTTAGTGACAATAGATTGCACGGCTCCATCATAAATGAACTTTGCCAGATCAAAAGTTTGGGTTACTTGTCTCTAGCCAACAACATGTTATCAGGATCGGTTCCAGGGTGCCTTGGGAATCTTTCATCGTTGCGATACTTGTACTTGCACTCTAACATATTGATTTCTGATATACCCTCTTCCCTTGGCAGTCTCAGAGATATTATTGAGTTAGATTTATCCAACAATGCTCTGAGTGGAAGAATTCCTCTAGAGATTTCGAGCTTTAGAGCACTTACAACGTTAAATTTGTCAACAAATCAAATTTCAGGAACCATTCCTACAACTATTGGTGGTATGGAGTTCTTGGATCTTTTCCAAAATAATTTGTCTGGTATGATTCCAAAGACCTTAGAGTCACTTGCCCATCTTAAATATATCAATCTTTCCTACAATTTATTGCATGGAGAAATTCCAAATGGTGGGCCTTTTCAAAATTTTACAGCTGAATCTTTTATGAAGAATGAAGATCTTCGTGGAAATCCCAAGCTACATGTCCAACCATGCAGAAATAGAAAGAAGCACAAGTCTGCTAAAGAGATGATTTTATTGAAATTCTTCTTGCCTATCATGCTGGCAGTTATTTTGGTTGTTTGCATAGTATTTCTAAAGCGTAAAAGAGATCATGTTAGTGATTCAACCAATAGGGATTCACTAAATTTGGAGACACTGATTAGGATATCCTACTATAAACTTCTACGGGGAACAAATGGATTCGATGAGAGCAATCTTCTTGGAAGGGGGAGCTTTGGATCAGTATACAAAGGAATTCTTTCAAGTGGAATGACAGTTGCTGCTAAAATATTTAACTCAAACTTGGAAGAGGCATTAAGGAGCTTTGATACTGAATGCGCTGCAATATGCAATTTACGTCATCGCAATCTCATTAAGATCAGCAGTTGCTCAAATGTTGATTTTAAATGTCTAATAATGGAATATATGCCCAATGGGAGTCTTGATAGATGGTTGTACTCTCATAACTATTGCTTAGATATCTTGCAAAGGTTAGACATAATGATCGATGTGGCTTCTGCGTTGGAGTATCTTCACCATGGTTCTTCTACACCGGTGGTCCATTGTGATGTAAAGCCAAGCAATGTTTTGTTGGATGAAGATATGGTGGCCCATCTTAGTGATTTTGGTATTGCCAAACTATTAAGTGAAGGGCAATTGGAAATTTATACCAAGATTTTGGCTACAATTGGCTATATGGCACCAGAGTATGGATCGAAAGGAGCTACTTCCGTGAAAGGAGATGTGTATAGTTATGGTATTTTGTTGATGGAAATGTTTACAAGGAAGAAGCCAACAGATGATATGTTTGTTCAAGGTCTGAGTCTGAAAGACTGGGTTAGCAAGTCCACACCACATTCAATATTCAACATTCTAGATGCCAATTTGCTGCAAGGAGACAATCAAAATATTGGTAACATATTATCACATATTTCATCAATCTTCGAGTTGGCCTTAAATTGTTGCAATGATTTGCCTGAGACACGAATGAATATGATGGAAGTTGTGGTGTCACTGAAAAAAATCAAAATCATGTTTATGCAAATTGTTAGAGGCACCACTTGA 2691 0.392 MEVPSAMLDWGESSMKIEVRRMLVGKANDREAELQWMDGDGEKRAQKKGVSVLVMEARDGRTGRVVGQRYVDHLAEKEIKKASGWADTNYGLKSNVGFGLSEKWEGRETWKLSPSGYIVGLSGDEHVEEGLIAIFQKERILSEVMQSLGRINLKRRHKEGEEEEWKLKKAKVAMEALKDNPNIGTVFDGAGEKITASSRFTEKAIALRNALMMIRERYTTVSFIPEIGRLDKLEVLALEHNHLSGPIPSNIFNISTLTRVFLSANSLSGLLPSNIGSGLPNLKELQLEYNEITGQIPNSISNASNLNYFRWGWNNFSGFIPNALGNLTMLIQVSLFSNYLNGPIPTTLNKLHGLQYLDFSDNRLHGSIINELCQIKSLGYLSLANNMLSGSVPGCLGNLSSLRYLYLHSNILISDIPSSLGSLRDIIELDLSNNALSGRIPLEISSFRALTTLNLSTNQISGTIPTTIGGMEFLDLFQNNLSGMIPKTLESLAHLKYINLSYNLLHGEIPNGGPFQNFTAESFMKNEDLRGNPKLHVQPCRNRKKHKSAKEMILLKFFLPIMLAVILVVCIVFLKRKRDHVSDSTNRDSLNLETLIRISYYKLLRGTNGFDESNLLGRGSFGSVYKGILSSGMTVAAKIFNSNLEEALRSFDTECAAICNLRHRNLIKISSCSNVDFKCLIMEYMPNGSLDRWLYSHNYCLDILQRLDIMIDVASALEYLHHGSSTPVVHCDVKPSNVLLDEDMVAHLSDFGIAKLLSEGQLEIYTKILATIGYMAPEYGSKGATSVKGDVYSYGILLMEMFTRKKPTDDMFVQGLSLKDWVSKSTPHSIFNILDANLLQGDNQNIGNILSHISSIFELALNCCNDLPETRMNMMEVVVSLKKIKIMFMQIVRGTT 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0733 896 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 685 893 - -
Dere10g0733 896 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 417 537 - -
Dere10g0733 896 PANTHER OS04G0122200 PROTEIN 208 338 - -
Dere10g0733 896 Pfam Leucine Rich Repeat 281 302 IPR001611 GO:0005515
Dere10g0733 896 ProSitePatterns Serine/Threonine protein kinases active-site signature. 728 740 IPR008271 GO:0004672|GO:0006468
Dere10g0733 896 Gene3D Ribonuclease Inhibitor 217 542 IPR032675 -
Dere10g0733 896 Pfam Protein kinase domain 611 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0733 896 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 221 396 - -
Dere10g0733 896 ProSiteProfiles Protein kinase domain profile. 610 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0733 896 SMART serkin_6 610 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0733 896 SUPERFAMILY Protein kinase-like (PK-like) 591 881 IPR011009 -
Dere10g0733 896 Gene3D Transferase(Phosphotransferase) domain 1 685 891 - -
Dere10g0733 896 Gene3D Phosphorylase Kinase; domain 1 572 684 - -
Dere10g0733 896 Pfam Leucine Rich repeats (2 copies) 377 417 IPR025875 -
Dere10g0733 896 SUPERFAMILY L domain-like 227 510 - -
Dere10g0733 896 SMART LRR_typ_2 399 423 IPR003591 -
Dere10g0733 896 SMART LRR_typ_2 447 471 IPR003591 -
Dere10g0733 896 SMART LRR_typ_2 279 303 IPR003591 -
Dere10g0733 896 SMART LRR_typ_2 230 254 IPR003591 -
Dere10g0733 896 SMART LRR_typ_2 492 516 IPR003591 -
Dere10g0733 896 SMART LRR_typ_2 375 398 IPR003591 -
Dere10g0733 896 ProSitePatterns Protein kinases ATP-binding region signature. 616 638 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0733 Dere-ChrDere10 12923584 12930393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0733 225 895 Receptor kinase-like Gene Family AT3G47570 36.627 6.48e-133 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dere10g0733 Pkinase 5.1e-44 CL0016