Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0730 ATGATTGATGTGGCATCTGCGTTGGAGTATCTTCATCATGGTTCTTTCACACCAGGGGTCCATTGTGATGTGAAGCCGAGCAATGTTTTGTTGGATGAAGATATGGTGGCCCATATTGCCAAACTATTAGGTGAAGGGCAGTTCTCCTTCCTCTCGGTTTTCTACTCCCCTCCTTCAGTTTCTGCTTTTCTTTTCCTTTCTGTTCTCTCTCAGTTTTCTGGTCTCGGTTTCTGCTACCTTCTCTTTTCAGTTTTCCTGGTCTCAGTTTTTACTGCCTTCTCTTTTCAGTCTTATGGTCTCGATTTCTGCTGCCTTCTTTTTTCAATTTTCCTGGTCTCGGTTTTTGCTGCCTTCTCTTTTCAGTTTTCTGGTCTCGGTTTCTGCTGCCTTCTCTTTTCAGTTTTCCTGGTCTCGGTTTCTGCTGCCTTCCCTTTTGAGTTTTCTGGTCTCGGTTTCTGCTGCCTTCTCTTTTCAGTTTTTCTGGTCTCGGTTTCTGCTTCAATTTCAGTTTTCAAGCTAAACCCTCAAATACTCAATGGTGCTCTTACTCTCTTCAGGAGAAACCAAAACGATGGTAGGTTGAAGAGTGCTCAGGCTGAACTGTCCATCCCTCCTTCTGCTTCAGAGTATGGATCCAAAGGAGCTATTTCCGCCAAAGGAGATGTGTATAGTTATGGTATTTTGCTGTTGGAAATGTTTACAAGGAAAAAACCAAATGATGACATGTTTGTTCAAGGACTAAGTTTGAAAGAGTAG 756 0.4286 MIDVASALEYLHHGSFTPGVHCDVKPSNVLLDEDMVAHIAKLLGEGQFSFLSVFYSPPSVSAFLFLSVLSQFSGLGFCYLLFSVFLVSVFTAFSFQSYGLDFCCLLFSIFLVSVFAAFSFQFSGLGFCCLLFSVFLVSVSAAFPFEFSGLGFCCLLFSVFLVSVSASISVFKLNPQILNGALTLFRRNQNDGRLKSAQAELSIPPSASEYGSKGAISAKGDVYSYGILLLEMFTRKKPNDDMFVQGLSLKE 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0730 251 Gene3D Transferase(Phosphotransferase) domain 1 1 54 - -
Dere10g0730 251 Gene3D Transferase(Phosphotransferase) domain 1 179 251 - -
Dere10g0730 251 SUPERFAMILY Protein kinase-like (PK-like) 207 245 IPR011009 -
Dere10g0730 251 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 207 251 - -
Dere10g0730 251 ProSiteProfiles Protein kinase domain profile. 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0730 251 SUPERFAMILY Protein kinase-like (PK-like) 1 40 IPR011009 -
Dere10g0730 251 Pfam Protein tyrosine and serine/threonine kinase 184 242 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0730 Dere-ChrDere10 12839566 12843349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0730 2 40 Receptor kinase-like Gene Family AT5G20480 64.103 1.97e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dere10g0730 PK_Tyr_Ser-Thr 3.5e-05 CL0016