Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0729 ATGCTAACCATGGGAAGACTTCGTTTCTCTCTAATCTTGTTCTTACTTCATTGCTTCTTGGCCTCCTTAGCTTGGAGTAAGATGAACATCACCACTGATAAATCTGCGCTTCTTGCTTTCAAATCTTCTATCACCAGGGATCCACATAATCTCTTAGCCAATTGGTCTGTTTCTTCTTCTCCATGCAATTGGATTGGTATTACTTGCAATACTCGCCATGGAAGGGTCCATTCCTTGAATCTTGGTAACATGGGCCTCAATGGCAAGATATCCCCACAGTTGGGAAATCTCTCATTCCTTGTTGAACTTGATCTTAGTAAAAACAAGTTTCATGGTCACTTGCCAGAAGAATTAGTACAATTGCGTAGATTGAAACAACTGAACTTGAGTTACAATGAATTTGATGGGGAAGTTCCAACATGGATAGGAGATTTATCTACACTTGGGCACTTGATTCTTCGTAACAATAGTTTTCGTGGATCTATTCCACTTTCTATATCCAACCTATCACGGTTGGAGACCTTATATCTGAGTGCTAATCTAATCGAGGGGACCATTCCGCCCGAGATTGGAAGACTTAATTACTTAAAGATTTTGGATCTTGCCATAAACAAGCTATCTGGAGACATACCACCAACGGTTTCCAACTTAACTTCACTTGACTCATTGGGTTTGTCGTATAACTCTTTGTCAGGAGGCATTCCAAGAGGGATTGGTGATCTTTCACAACTAAAGATACTGTATCTTGATATGAACGAGCTTTCTGGCTCTATATCATCAACAATGTTTAACAACTCAGCGCTACAGCAGATTGATCTTTCCTCTAATAATTTTTCTGGTGTTCTCTCATCAAATATATGTCATGGGCTTCATAATCTTGAAATACTCTATCTATATTCAAATGACTTCACTGGTGAGATACCATCTGGTTGGCATCAATGCAAAGAATTAATAGATTTGGAAATGTCCACTAACGGATTCAAAGGAAACATACCCAGTGACATAGGAAATTTGACCAACCTCCAATTCTTATACCTTGCTCAAAACAACTTGGAAGGTGAAATTCCCCCGTCTCTTTTCAACATTACTTCTTTGATAGATGTCAGCCTTAGCTTCAACAATTTTCATGGTAATCTACCAGAAGAGATGTGTCATCAACTTCCTTTGCTAGAATTTTTGGATTTGACTGACAATCAATTCAAGGGAAGCATTCCAAAATCAATAATCAACTGTACATCTATGGAAGAATTATATTTGAATAACAACTCATTTACAGGTTTTATACCCAATGAGATAGGCAATCTTGATAAACTTGATGTTTTGAGTTTGTCAAAAAATTATTTGAATGGACCGATTCCTTCCAATATTTTCAACATTTCAACATTGACTAAAATGTACCTTGGAGCTAATTACCTCACTGGCCTTCATTCGCCCAATTTAGAAAATGGCCTTCCCAACCTGAAGGAATTGAATCTGGAGCAAAATGAAATTACTGGACAAATTCTTAAGATCATATCCAATGCTTCAAATCTCGATTATTTAAAGATAGGGTTGAATAAATTTAGTGGAGCTATACCAAGTGCATTTGGAAATTTAACCAAGTTGATCCGTGTAAGTTTATTTTCGAATGATTTCAGTGGGCCTATTCCAACTGAAATAAACAAATTGCAAGGTCTTCAATATTTGGATCTTAGTGAAAATAGGCTGCAAGGCACCATCATAAGTGAACTTTGCCAGATCAAAAGTTTGGGTTACTTGTATCTAGACCACAACATGTTCATAGGATCGGTTCCTGGTTGCCTTGGGGATCTTACTTTGTTACGGTACCTGTACTTGGGCTCTAACAAATTGATTTCTCATATACCCTCTTCTATTTGGAGTCTCAATGATATTATAGAATTAGATTTATCCAACAATGCATTGAATGGAAGAATTCCTCTTGAGATTTCAAACTTGAGAGCACTTTTGGTGTTGGACTTGTCAACAAATATAATTTCAGGAAACATTCCTACAGTTGTAGGCAGCCTGCAAACTTTGCTAACCTTATCTTTGGCACATAACAAACTGGAAGGGCCTATTCCTAAATCACTTGGTAGCATGACAAGTATGGAGTTCTTGGATCTTTCCCAAAATTTTTTGTCTGGTGTGATTCCGAAGACCTTAGAGTCACTTACCCATCTTAAATATATCAATCTTTCCTACAATTTATTGTATGGAGAAATTCCAAATGGTGGGCCTTTTCAAAATTTTACAGCTGAATCTTTTATGAAGAATGAAGGTCTTTGTGGAAATCCCAAACTACATATCCACCCATGTAGAAATGGAAACAAGCATAGGTCTACTAAAGAGATGCTTTTGAAATGCTTGTTACCTATCATGTTGGCAATCATTTTGGCTGTTTCATGCATGGTCTATGTAAAGCGCAAAAGAGAACATGTTAGTGATTTAGCCAACAAGGACTTATTGGATTTGGAGACTCTAATTAGGATATCTTACTATGAGCTTGTACAGGGAACAAATGCATTTGATGAGAGTAATCTTCTTGGCAAGGGAAGTTTTGGATCTGTATACAGAGGAATTCTTTCAAGTGGAAAGATAATTGCTATTAAAATCTTTAACTTAGACTTGGAAGAAGCATTAAGGAGCTTTGATACTGAATGTGCTGCCTTATGCAATTTACGCCATCGCAATCTCATTAAGATCATCAGTACTTGCTCCAATGTTAATTTTAAATCTCTAATAATGGACTTTATGCCAAATGGGAGTCTTGACAGATGGTTGTACTCTTATAACTATTGCTTGGATATCTTACAAAGGTTGAATATAATGATTGATGTGGCATCTGCATTAGAATATCTTCATCATGGGTCTTCAATTCCTGTGGCTCATTGTGATGTAAAGCCAAGCAATGTTTTGTTGGATGAAGATATGGTGGCTCATCTTAGTGATTTTGGTATTGCCAAATTGTTAGGTGAAGGGCAGCAAGAAATTTTTACCACGACTTTGGCTACACTTGGCTATATGGCACCAGAATATGGATCAGAAGGAGTTGTTTCTGCAAAAGGAGATGTCTATAGCTATGGTATTATGTTGATGGAAATATTTACAAGGAAGAAGCCAACAAATGACATGTTCGTTCATGGTTTAACCTTGAAAGAATGGGTTAGTAAATCAACACCACATTCAATAATCAATATTCTTGATGCCAATTTGCTGCAAGGTGACAATCAAAATATTGGTAACATATTATCAAATATGTTACTAATTTTTGAGTTAGCCTTGAATTGTTGCACTGATCTACCCGAGATGCGAATCAATATGACAGAAGTTGTAGTATCATTGAAAAAAATTAAGGTCATCTTTATACAAAATAGTTGA 3378 0.365 MLTMGRLRFSLILFLLHCFLASLAWSKMNITTDKSALLAFKSSITRDPHNLLANWSVSSSPCNWIGITCNTRHGRVHSLNLGNMGLNGKISPQLGNLSFLVELDLSKNKFHGHLPEELVQLRRLKQLNLSYNEFDGEVPTWIGDLSTLGHLILRNNSFRGSIPLSISNLSRLETLYLSANLIEGTIPPEIGRLNYLKILDLAINKLSGDIPPTVSNLTSLDSLGLSYNSLSGGIPRGIGDLSQLKILYLDMNELSGSISSTMFNNSALQQIDLSSNNFSGVLSSNICHGLHNLEILYLYSNDFTGEIPSGWHQCKELIDLEMSTNGFKGNIPSDIGNLTNLQFLYLAQNNLEGEIPPSLFNITSLIDVSLSFNNFHGNLPEEMCHQLPLLEFLDLTDNQFKGSIPKSIINCTSMEELYLNNNSFTGFIPNEIGNLDKLDVLSLSKNYLNGPIPSNIFNISTLTKMYLGANYLTGLHSPNLENGLPNLKELNLEQNEITGQILKIISNASNLDYLKIGLNKFSGAIPSAFGNLTKLIRVSLFSNDFSGPIPTEINKLQGLQYLDLSENRLQGTIISELCQIKSLGYLYLDHNMFIGSVPGCLGDLTLLRYLYLGSNKLISHIPSSIWSLNDIIELDLSNNALNGRIPLEISNLRALLVLDLSTNIISGNIPTVVGSLQTLLTLSLAHNKLEGPIPKSLGSMTSMEFLDLSQNFLSGVIPKTLESLTHLKYINLSYNLLYGEIPNGGPFQNFTAESFMKNEGLCGNPKLHIHPCRNGNKHRSTKEMLLKCLLPIMLAIILAVSCMVYVKRKREHVSDLANKDLLDLETLIRISYYELVQGTNAFDESNLLGKGSFGSVYRGILSSGKIIAIKIFNLDLEEALRSFDTECAALCNLRHRNLIKIISTCSNVNFKSLIMDFMPNGSLDRWLYSYNYCLDILQRLNIMIDVASALEYLHHGSSIPVAHCDVKPSNVLLDEDMVAHLSDFGIAKLLGEGQQEIFTTTLATLGYMAPEYGSEGVVSAKGDVYSYGIMLMEIFTRKKPTNDMFVHGLTLKEWVSKSTPHSIINILDANLLQGDNQNIGNILSNMLLIFELALNCCTDLPEMRINMTEVVVSLKKIKVIFIQNS 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0729 1125 Gene3D Phosphorylase Kinase; domain 1 802 917 - -
Dere10g0729 1125 SUPERFAMILY L domain-like 49 356 - -
Dere10g0729 1125 Gene3D Ribonuclease Inhibitor 462 781 IPR032675 -
Dere10g0729 1125 Pfam Leucine Rich Repeat 415 435 IPR001611 GO:0005515
Dere10g0729 1125 SUPERFAMILY Protein kinase-like (PK-like) 826 1114 IPR011009 -
Dere10g0729 1125 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 918 1125 - -
Dere10g0729 1125 Gene3D Transferase(Phosphotransferase) domain 1 918 1122 - -
Dere10g0729 1125 SMART LRR_typ_2 556 580 IPR003591 -
Dere10g0729 1125 SMART LRR_typ_2 387 411 IPR003591 -
Dere10g0729 1125 SMART LRR_typ_2 217 240 IPR003591 -
Dere10g0729 1125 SMART LRR_typ_2 241 265 IPR003591 -
Dere10g0729 1125 SMART LRR_typ_2 700 723 IPR003591 -
Dere10g0729 1125 SMART LRR_typ_2 724 748 IPR003591 -
Dere10g0729 1125 SMART LRR_typ_2 604 628 IPR003591 -
Dere10g0729 1125 SMART LRR_typ_2 169 193 IPR003591 -
Dere10g0729 1125 SMART LRR_typ_2 484 511 IPR003591 -
Dere10g0729 1125 SMART LRR_typ_2 338 362 IPR003591 -
Dere10g0729 1125 SMART LRR_typ_2 97 121 IPR003591 -
Dere10g0729 1125 SMART LRR_typ_2 290 314 IPR003591 -
Dere10g0729 1125 SMART LRR_typ_2 435 459 IPR003591 -
Dere10g0729 1125 Pfam Leucine rich repeat 196 254 IPR001611 GO:0005515
Dere10g0729 1125 Pfam Leucine rich repeat 679 737 IPR001611 GO:0005515
Dere10g0729 1125 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 458 1115 - -
Dere10g0729 1125 Gene3D Ribonuclease Inhibitor 147 214 IPR032675 -
Dere10g0729 1125 Gene3D Ribonuclease Inhibitor 32 146 IPR032675 -
Dere10g0729 1125 ProSitePatterns Serine/Threonine protein kinases active-site signature. 961 973 IPR008271 GO:0004672|GO:0006468
Dere10g0729 1125 Gene3D Ribonuclease Inhibitor 215 461 IPR032675 -
Dere10g0729 1125 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 380 475 - -
Dere10g0729 1125 SMART serkin_6 842 1121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0729 1125 SUPERFAMILY RNI-like 288 523 - -
Dere10g0729 1125 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 30 187 - -
Dere10g0729 1125 ProSiteProfiles Protein kinase domain profile. 842 1122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0729 1125 SMART LRR_sd22_2 604 630 - -
Dere10g0729 1125 SMART LRR_sd22_2 193 219 - -
Dere10g0729 1125 SMART LRR_sd22_2 556 579 - -
Dere10g0729 1125 SMART LRR_sd22_2 435 461 - -
Dere10g0729 1125 SMART LRR_sd22_2 484 510 - -
Dere10g0729 1125 SMART LRR_sd22_2 700 726 - -
Dere10g0729 1125 SMART LRR_sd22_2 338 364 - -
Dere10g0729 1125 SMART LRR_sd22_2 169 184 - -
Dere10g0729 1125 SMART LRR_sd22_2 290 313 - -
Dere10g0729 1125 Pfam Protein kinase domain 843 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0729 1125 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 285 379 - -
Dere10g0729 1125 FunFam Piriformospora indica-insensitive protein 2 188 284 - -
Dere10g0729 1125 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 480 776 - -
Dere10g0729 1125 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Dere10g0729 1125 SUPERFAMILY L domain-like 506 765 - -
Dere10g0729 1125 ProSitePatterns Protein kinases ATP-binding region signature. 848 870 IPR017441 GO:0005524
Dere10g0729 1125 FunFam Serine-threonine protein kinase plant-type 823 917 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0729 Dere-ChrDere10 12812704 12821847 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0729 4 1118 Receptor kinase-like Gene Family AT5G46330 35.279 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dere10g0729 Pkinase 2.9e-43 CL0016