Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0723 ATGTGCCATCAACTTCCTTTGCTAGAACTTTTGGATTTGACCAATAATCAATTCAAGGGAAGCATTCCAAAATCAATAATCAACTGCACATCTTTAGAAGAATTATATTTGAATAACCACTCATTTGCAGATCAAAAGTTCGGGTTACATGTATCTAGACCACAACATGTTCTTAGGAACGGTTCATGGTTGCCTTGGGGATCTTACTTGTTGCGATACTTGTACTTGGGCTCTAACAAATTGATTTCTCATATACCCTCTTCTATTTGGAATCTCAATGATATTATGGAATTAGATTTATCCAACAATGCATTGAGTGGAAGAATTCCTCTTGAGATTTCAAACTTGAGAGCACTTACGGTGTTGGACTTGTCAACAAATATAATTTCAGGAAGCATTCCTACAGTTGTAGGCAGCCTGCAAACTTTGCTAACCTTATCTTTGGCACTTAACAAGCTGGAAGGGCCTATTCCTAAATCACTTGGTGGCATGACAAGCATGGAGTTCTTGGATCTTTCCCAAAAATTTTTGTCTAGTGTGATTCCAAAGACCTTAGAGTCACTTGCCCATCTTAAATATATCAATCTTTCCTACAATTTATTAAATGGAGAAATTCCAAATGGTGGGCCTTTTCAAAATTTTACAGCTGAATCTTTTTTTATGAATGATGGTCTTTGTGGAAAGCCTCAACTACATGTCCACCCATATAGAAATGGAAACATGCATAGGTCTACTAAGGAGATGATTTTAAGCCTGTTACCTATCATGTTGGCAATCATTTTGGTTGTTTCTTGCATGGTCAATGTAAAGCACAAAAGAGAACATGTTAGTGATTTAGCCAACAAGGACTTATTGGATTTGGAGCCTCCAATTAAGATATCTTACTATGAGCCTCTGCAGGGAATAAATGGATTTAATGAGAGTAATCTTCTTGGCAGGGGAAGTTTTGGATCTGTATACAGAGGAATTCTTTCAAGTGGAAAGATAATTGCTATTAAAATCTTTAACTTAGACTTGGAAGAAGCATTAAGGAGCTTTGATACTGAATGTGCTGCCTTATGCAATTTACGCCATCGCAATCTCATTAAAATCATCAGTACTTGCTCCAATGTTGATTTTAAATCTCTAATAATGGACTTTATGCTAAATGGGAGTCTTGATAGATGGTTGTACTCTTATAACAATTGCTTAGATATCTTACAAAGGTTGAATATAATGATCGATACATTTTTTCTTCATAGCAAGACAAAACTGAGTGCACTGCATTCTCCTTCATTGGCTCTCCTCCTTTGCAAAGATGTTCGGATAATTAATCTGTTAGCAATTGGCCAGAGGTACTTTCAGCAAGCTGCAATAGCACATCCACTGGTTGGACTCCTAGGAGATGGAGGTTCAGACTGCTGTAGGATCCAAACAAAAATTCTTGCGAACTCAACTATTATGATATATCTGTCAATTCAATTAGCAGCTGAAGGTGTGTCAACATCCACCACTAGTGCACTCAAGATATTGTTGCATGCTAGCATTTCAACAGATTTCAGTAGGGTGGCATCTGATTTTATCTTAACCACTTTATTTCTTGGTTTGGATCTTTCTCGGTTTGCTTCCGCTTCTCGATTTTCTGGTTTTGCTTCTTGGTTTGCTTCCAGTCTCGGTTTTCTGTATCTTCATCGTGGGTCTTCAATTCCTATGGTTCATTGTGATGTAAAGCCAAGCAATGTTTTGTTGGATGAAGATATGGTGGCTCATCTTAGTGATTTTGGCATTGCCAAATTGTTAGAATATGGATCTGAAGGAGTTGTTTCTGCAAAAGGAGATGTGTATAGCTATGGTATTATGTTGATGGAAATATTTACAAGGAAGAAGCCAACAAATGACATGTTCGTTCATGGTTTGAGCTTGAAAGAATGGGTTATCAAATCAACACCACATTCAATAATCAATATTCTTGATGCCAATTTACTGCAAGGTGGCAATCAAAATATTGGTAACATATTATCAAATATGTCATTAATTTTTGAGTTAGCCTTGAATTGTTGCACTGTTCTACCCGAGATACGAATCAATATGACATAA 2076 0.3671 MCHQLPLLELLDLTNNQFKGSIPKSIINCTSLEELYLNNHSFADQKFGLHVSRPQHVLRNGSWLPWGSYLLRYLYLGSNKLISHIPSSIWNLNDIMELDLSNNALSGRIPLEISNLRALTVLDLSTNIISGSIPTVVGSLQTLLTLSLALNKLEGPIPKSLGGMTSMEFLDLSQKFLSSVIPKTLESLAHLKYINLSYNLLNGEIPNGGPFQNFTAESFFMNDGLCGKPQLHVHPYRNGNMHRSTKEMILSLLPIMLAIILVVSCMVNVKHKREHVSDLANKDLLDLEPPIKISYYEPLQGINGFNESNLLGRGSFGSVYRGILSSGKIIAIKIFNLDLEEALRSFDTECAALCNLRHRNLIKIISTCSNVDFKSLIMDFMLNGSLDRWLYSYNNCLDILQRLNIMIDTFFLHSKTKLSALHSPSLALLLCKDVRIINLLAIGQRYFQQAAIAHPLVGLLGDGGSDCCRIQTKILANSTIMIYLSIQLAAEGVSTSTTSALKILLHASISTDFSRVASDFILTTLFLGLDLSRFASASRFSGFASWFASSLGFLYLHRGSSIPMVHCDVKPSNVLLDEDMVAHLSDFGIAKLLEYGSEGVVSAKGDVYSYGIMLMEIFTRKKPTNDMFVHGLSLKEWVIKSTPHSIINILDANLLQGGNQNIGNILSNMSLIFELALNCCTVLPEIRINMT 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0723 691 SMART serkin_6 305 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0723 691 Gene3D Ribonuclease Inhibitor 1 238 IPR032675 -
Dere10g0723 691 ProSiteProfiles Protein kinase domain profile. 305 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0723 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 564 576 IPR008271 GO:0004672|GO:0006468
Dere10g0723 691 FunFam Serine-threonine protein kinase plant-type 287 380 - -
Dere10g0723 691 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 113 233 - -
Dere10g0723 691 SUPERFAMILY Protein kinase-like (PK-like) 551 690 IPR011009 -
Dere10g0723 691 Gene3D Transferase(Phosphotransferase) domain 1 546 595 - -
Dere10g0723 691 Gene3D Transferase(Phosphotransferase) domain 1 596 691 - -
Dere10g0723 691 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Dere10g0723 691 SUPERFAMILY L domain-like 4 231 - -
Dere10g0723 691 Gene3D Transferase(Phosphotransferase) domain 1 294 425 - -
Dere10g0723 691 Pfam Protein kinase domain 306 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0723 691 Pfam Protein kinase domain 552 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0723 691 PANTHER OS04G0122200 PROTEIN 552 681 - -
Dere10g0723 691 SUPERFAMILY Protein kinase-like (PK-like) 289 413 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0723 Dere-ChrDere10 12636817 12645231 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0723 555 688 Receptor kinase-like Gene Family AT3G47570 37.500 2.02e-27 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dere10g0723 Pkinase 1.2e-09 CL0016