Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0722 ATGCTAAACATGGCAAAACTTCATTTCTCTGTCATCTTGTTCTTACTGCAATGTTTCATGGCATCCTTAGCTTGGAGTATGACGAACATCACCGCAGATAAATCTGCACTTCTTGCTTTCAGGTCTTCAATCACCTTAGATCCATACAATCTATCAGCTAATTGGTCTATCTCATCTTCTCCATGCAATTGGGTTGGTGTCTCTTGCAATGCTCGCCATGGAAGGGTCCATTCCTTGAACCTTCGTGACATGGGTCTCAGGGGTAGAATATCTCCACAATTGGGAAACCTCTCGTTTCTTGTTGAACTTGATCTGAGTAATAACAATTTCTTTAGTCAACTGCCAAAGGAGATAATTCGACTGCGTAGATTAAAACTACTCAATTTGAGCTACAATGAATTTGACGGAGAAATTCCGGCATGGATTGGAGATTTTTCAATGCTTCAATACTTGAACTTCTGTCATAATAAATTGAGTGGATTTATTCCCTCATCTGTATCTAACCTGTCAAGGCTAGAGACTTTGAATTGGAATTTCAATTTTATTGAAGGGACCATTCCCTCTGAGATGGGAAAACTTGAGAACTTGAAGATTTTACAAATTGGGGGAAACAATCTTTCAGGAAGCATTCCAAAAGAGATTGGTGATCTTCCACAACTATGGGGAATTTATCTTCCTGACAATCAGCTTTCTGGCTCTATACCATCAACAATATTTAATAACTCCGTGTTACAAGAGATAAGTTTTGCCTATAATAAAATTGATGGTGTTCTCCCCTCAAATATATGTCATGGACTTCCAAAAGTGGAGCTACTTTTTTTTCATCAAAATTACTTCTCCGGTGAAATACCATCTGTTTGGCATCAATGCAAAGAACTGAAATATTTGGGATTATCCAACAACGGATTCAGAGGATACATACCAAGTGACGTTGGAAATTTGACGAAGCTCCAAGTCTTTTACCTTGATAACAACAACTTGGAAGGTGAAATTCCATCATCTCTCTTCAACATATCTTCCTTGAGAGAAGTTAGTCTATGGAAAAACAATCTGCATGGTAGTCTCCCACTATCAATTAGCAATTACACTTTGCTCGAAAAGTTATATCTAGATCACAACTCCTTTACAGGTGAAATTCCCCCTTCTCTTTTTAACTTGCCCTCCTTGAGAGAGATTGACCTTGGCTACACCTATTTACATGGTAAGTTGCCACAAGAGATGTGCCATAAGCTTCCTTCACTTGAAATCTTCGTTTTAACTCAAGATCAATTTGAGGGAAGCATTCCAGAGTCAATTAGCAACTGCACATCATTGAAAGGATTATATTTGTATAACAACTCATTTACAGGTATCATACCCAAGGATATGGGCAATCTTCACAAACTTGAGATATTAGATTTGGGAGACAACTATTTTAGTGGCCCTATTCCTTCCAAGATCTTCAACATTTCAACTTTGTCATACTTGTTTCTAGGAGTTAATTCCTTCTCTGGGTTCATCCCATCAGATATGGGAAGTGGCCTTCCCAACCTAAGGCATCTACATCTCACAAAAAATGAACTTACAGGAAAACTCCCAAGTAGCATATCCAATGCTTCTAAACTCATTGACTTAGTATTAGGGTTGAATAGGTTTAGCGGTGTTATACCCAATTCACTGGGAAATTTAACAAACTTGATTGAAATTAGTTTAGATGGGAATGATTTGAATTGGCTTATTCCTAAATCGCTGAAAAGATTACCAAGGCTTCAATATTTGGATCTCAGAAACAACAGATTGCAAGGTTCCATCATAGATGAACTTTGCCAAATCAAAAGTTTGAGTGAATTGTATCTTGATCAAAACATGTTTTCGGGATTTGTTCCAGGGTGCCTTGGAAATCTTACTTATTTGCGAAAGTTGTACTTGGGCTCTAACAAATTGATTTCGCATATACCCTCTTCTTTATGGAGTCTCAAAGATATCATTGAGTTAGACTTATCCTCCAATGCATTTAGTGGAAGAATTCCACTTGAGATTTCCAATATGAGAGCATTGACACTGTTGAACTTATCAAGAAATCAAATTTCTGGAAACATTCCTACAACTTTTGGTGGCTTGAAAACTTTGCTAAACCTATCTCTTGCACATAACAAATTGCAAGGGCCTATTCCTGAATCACTTGGCAGCATGACAAGCATGGAGTTCTTGGATCTATCCCAAAATAATTTGTCAAGTGTGATTCCAAAGACCTTAGAGTCACTTGCCCATCTTAAATATATTAATCTTTCCTACAACTTATTGTGCGGTGAAATTCCAAATGGCGGTCCTTTCCAAAATTTTACAGCTGAATCTTTTTTGATGAATGAATGTCTATGTGGAAATCCCGAACTACTTGTCCTGCCATGCATAAATGGAAACAAGCATAGGTTTACTAAAGATATCCTTTTGTTGAAATGCATGTTGCCTGTCCTGTTAGCGGTCATTTTGGTCATTTCATGCATAGTCTTTCTAAAGCGCAAAAGAGATCATGTCAGTGATTCAACCAACAAGGATTTATTAAATTTGGAGATACCAATTAAGATAACCTACTATGAACTTTTACAGGGAACTAATGGATTTGATGAGAGTAATCTTCTTGGCAAGGGGAGTTTTGGATCAGTATACAAAGGAATTCTTTCAAGTGGAAAGATAGTTGCTATTAAAATATTTAACTTAGACTTGGAAGAAGAACTAAGGAGCTTTGATACTGAATGTATTGCCATGTGCAATTTACGCCATCGCAATCTCGTTAAGATCATCAGCAGCTGCTCAAATGTTGATTTTAAATCTTTGATAATGGAATTCATGTCAAATGGGAATCTTGACAGATGGTTGTACTCTCATAATTATTGCTTAGATATCTTGCAAAGGTTAGCCATAATGATTGATGTGGCTTCTGCATTAGAATATCTTCACCATGGTTCATCTACACCAGTGGTTCATTGTGATATAAAGCCTAGCAATATTTTGTTGGATGAAGATATGGTGGCCCATCTTAGTGATTTTGGGATTGCAAAATTGTTAAGTGATGAGCAGCTAGAAATTCATACCAAGACTTTGGCTACATTTGGCTACATGGCACCAGAGTATGGATCCAATGGAGTTGTTTCCACAAAGGGAGATGTGTATAGTTATGGCATTATGCTGATGGAAATGTTTACAAGGAAGAAGCCAAGTGATGACATGTTTGTTCAAGGTCTAACTATGAAAGATTGGGTTAGCAAAGCAACACCACATTCAATAATCAACATTCTTGATGCCAATTTGTTGCAAGGAGACAACCAAGATATTGGCAATATATCATCACTTATGTTGTCTATTTTTGAGTTAGCATTGAATTGTTGCTTTGATTTACCTGAGGCACGAATTAATATGATAGATGTTGTGGTGTCATTGAAAAAAATCAAGGTCATATTAATGCAAAATGATAGAGGTTTAGGATTTAATGTTTAG 3474 0.3685 MLNMAKLHFSVILFLLQCFMASLAWSMTNITADKSALLAFRSSITLDPYNLSANWSISSSPCNWVGVSCNARHGRVHSLNLRDMGLRGRISPQLGNLSFLVELDLSNNNFFSQLPKEIIRLRRLKLLNLSYNEFDGEIPAWIGDFSMLQYLNFCHNKLSGFIPSSVSNLSRLETLNWNFNFIEGTIPSEMGKLENLKILQIGGNNLSGSIPKEIGDLPQLWGIYLPDNQLSGSIPSTIFNNSVLQEISFAYNKIDGVLPSNICHGLPKVELLFFHQNYFSGEIPSVWHQCKELKYLGLSNNGFRGYIPSDVGNLTKLQVFYLDNNNLEGEIPSSLFNISSLREVSLWKNNLHGSLPLSISNYTLLEKLYLDHNSFTGEIPPSLFNLPSLREIDLGYTYLHGKLPQEMCHKLPSLEIFVLTQDQFEGSIPESISNCTSLKGLYLYNNSFTGIIPKDMGNLHKLEILDLGDNYFSGPIPSKIFNISTLSYLFLGVNSFSGFIPSDMGSGLPNLRHLHLTKNELTGKLPSSISNASKLIDLVLGLNRFSGVIPNSLGNLTNLIEISLDGNDLNWLIPKSLKRLPRLQYLDLRNNRLQGSIIDELCQIKSLSELYLDQNMFSGFVPGCLGNLTYLRKLYLGSNKLISHIPSSLWSLKDIIELDLSSNAFSGRIPLEISNMRALTLLNLSRNQISGNIPTTFGGLKTLLNLSLAHNKLQGPIPESLGSMTSMEFLDLSQNNLSSVIPKTLESLAHLKYINLSYNLLCGEIPNGGPFQNFTAESFLMNECLCGNPELLVLPCINGNKHRFTKDILLLKCMLPVLLAVILVISCIVFLKRKRDHVSDSTNKDLLNLEIPIKITYYELLQGTNGFDESNLLGKGSFGSVYKGILSSGKIVAIKIFNLDLEEELRSFDTECIAMCNLRHRNLVKIISSCSNVDFKSLIMEFMSNGNLDRWLYSHNYCLDILQRLAIMIDVASALEYLHHGSSTPVVHCDIKPSNILLDEDMVAHLSDFGIAKLLSDEQLEIHTKTLATFGYMAPEYGSNGVVSTKGDVYSYGIMLMEMFTRKKPSDDMFVQGLTMKDWVSKATPHSIINILDANLLQGDNQDIGNISSLMLSIFELALNCCFDLPEARINMIDVVVSLKKIKVILMQNDRGLGFNV 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0722 1157 ProSitePatterns Protein kinases ATP-binding region signature. 873 895 IPR017441 GO:0005524
Dere10g0722 1157 Gene3D Ribonuclease Inhibitor 184 242 IPR032675 -
Dere10g0722 1157 SMART LRR_typ_2 748 772 IPR003591 -
Dere10g0722 1157 SMART LRR_typ_2 724 747 IPR003591 -
Dere10g0722 1157 SMART LRR_typ_2 362 386 IPR003591 -
Dere10g0722 1157 SMART LRR_typ_2 556 579 IPR003591 -
Dere10g0722 1157 SMART LRR_typ_2 97 121 IPR003591 -
Dere10g0722 1157 SMART LRR_typ_2 459 483 IPR003591 -
Dere10g0722 1157 SMART LRR_typ_2 676 699 IPR003591 -
Dere10g0722 1157 SMART LRR_typ_2 580 603 IPR003591 -
Dere10g0722 1157 SMART LRR_typ_2 314 338 IPR003591 -
Dere10g0722 1157 SMART LRR_typ_2 628 652 IPR003591 -
Dere10g0722 1157 SMART LRR_typ_2 193 217 IPR003591 -
Dere10g0722 1157 SMART LRR_typ_2 604 627 IPR003591 -
Dere10g0722 1157 SMART LRR_typ_2 508 532 IPR003591 -
Dere10g0722 1157 ProSitePatterns Serine/Threonine protein kinases active-site signature. 986 998 IPR008271 GO:0004672|GO:0006468
Dere10g0722 1157 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Dere10g0722 1157 Gene3D Transferase(Phosphotransferase) domain 1 943 1151 - -
Dere10g0722 1157 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 144 234 - -
Dere10g0722 1157 Gene3D Ribonuclease Inhibitor 506 805 IPR032675 -
Dere10g0722 1157 Gene3D Ribonuclease Inhibitor 31 183 IPR032675 -
Dere10g0722 1157 Gene3D Phosphorylase Kinase; domain 1 829 942 - -
Dere10g0722 1157 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 507 800 - -
Dere10g0722 1157 FunFam Leucine-rich repeat receptor-like kinase 33 143 - -
Dere10g0722 1157 Gene3D Ribonuclease Inhibitor 243 337 IPR032675 -
Dere10g0722 1157 SMART LRR_sd22_2 459 485 - -
Dere10g0722 1157 SMART LRR_sd22_2 193 219 - -
Dere10g0722 1157 SMART LRR_sd22_2 314 340 - -
Dere10g0722 1157 SMART LRR_sd22_2 508 534 - -
Dere10g0722 1157 SMART LRR_sd22_2 580 603 - -
Dere10g0722 1157 SMART LRR_sd22_2 628 644 - -
Dere10g0722 1157 SMART LRR_sd22_2 724 750 - -
Dere10g0722 1157 SUPERFAMILY Protein kinase-like (PK-like) 849 1139 IPR011009 -
Dere10g0722 1157 SUPERFAMILY L domain-like 531 790 - -
Dere10g0722 1157 SUPERFAMILY L domain-like 48 287 - -
Dere10g0722 1157 FunFam Leucine-rich repeat receptor-like protein kinase TDR 238 506 - -
Dere10g0722 1157 FunFam Serine-threonine protein kinase plant-type 849 942 - -
Dere10g0722 1157 Pfam Protein kinase domain 868 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0722 1157 SUPERFAMILY RNI-like 103 615 - -
Dere10g0722 1157 SMART serkin_6 867 1145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0722 1157 Pfam Leucine Rich Repeat 510 531 IPR001611 GO:0005515
Dere10g0722 1157 Pfam Leucine Rich Repeat 148 169 IPR001611 GO:0005515
Dere10g0722 1157 ProSiteProfiles Protein kinase domain profile. 867 1146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0722 1157 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 943 1151 - -
Dere10g0722 1157 Pfam Leucine rich repeat 705 761 IPR001611 GO:0005515
Dere10g0722 1157 Pfam Leucine rich repeat 606 664 IPR001611 GO:0005515
Dere10g0722 1157 Pfam Leucine rich repeat 535 593 IPR001611 GO:0005515
Dere10g0722 1157 Pfam Leucine rich repeat 365 423 IPR001611 GO:0005515
Dere10g0722 1157 Gene3D Ribonuclease Inhibitor 338 505 IPR032675 -
Dere10g0722 1157 PANTHER RECEPTOR-LIKE PROTEIN 55 573 1143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0722 Dere-ChrDere10 12489075 12498885 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0722 4 1143 Receptor kinase-like Gene Family AT5G46330 33.502 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dere10g0722 Pkinase 1.5e-45 CL0016