Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0697 ATGTGGCCATCTTTGGTGGCACAAGTTCCAGGGACGAGGTTTGTTCCTAAAGATGCTGAACTTGTTACATATTATCTTTACGGGAAGGTGACAGGACAAACACTACCAGAAGGAGTCATTATTGAATGCGATCTTTATGGGAATGAGAACCCATGGGATATATGGAAATGCTACAATGAGAAGGTGGTCAGGTCGTCAGAGGGAGAAGACTTATACATGTTCACAAGACTGAAGAGAAAGAACCCTACGGCTAAGCGTGTGGAGAGAAAGGTGGGGATAGGGACATGGCAAGGAGAAGCCATTGGAAAGCAGATTATGGTTCCTGGGATTGATCAATGTGTTGGATTCATGAAGAGATTTCGATTTGAGATGAGTCAAACTGATCACGATGGTGCATGGATCATGCACGAGTACTCTCTTAATCCCTCTCAATTTCCTCATGATTTCCAGATTAATGATTATGTTCTCTGTCGGCTTAGAAAGAATGATAGAATTATGAAAAGGTATAAACAAAGAAAAACATTACACCCTCAGAATACATATTCATGTCCTGACTTGGATCAATTAAAAATAGAAACGTTGTCACAAGATGCTTCACTAGAAAATGTGCAAAATGGTATAAAACTAGAGAAGGAAAATGTGAATATACAAAAGGACACTGAATTAGAGAATGTTCAATCGACCTTTCCTAGTGAAGAAGAATTTTTTAATGAACACGAAGATAGTTCTCCTAATCAATTGCCTCAATTTGGAGCGGAGATCAAACAAAACAACATAGAAGCAGAAAACAAAAATGTGAATATGCAGAAGGACACCAAGTTTAAGAACATTCAATCAATCATCACTTTTAAAGAAGCATCTTCCCATGAACTAGATCAAAATTTTTCTCCTAATCTGTCACTTCGATTTGTAGAAGAGACGAAACAAAATGGCATAGCAACAGTCGAAGAAAATGTGCAGAAGAACAGTAAATTAGAGAACATTCAATCAACTGTTTATGATAAAAATCAACAAGAAGATAATTTGTCTGTCAACCAATTGCTTCAATTTATAGATGAACATATTCTAGAGATGCCTATATCTACCATGCTGGATGATCAAGAACTCTTTTTTGAAAAAGAGACGAACGAATTTGATGATGACTTTGACTCATTGTACGGCTTATTCTTTTAA 1173 0.3674 MWPSLVAQVPGTRFVPKDAELVTYYLYGKVTGQTLPEGVIIECDLYGNENPWDIWKCYNEKVVRSSEGEDLYMFTRLKRKNPTAKRVERKVGIGTWQGEAIGKQIMVPGIDQCVGFMKRFRFEMSQTDHDGAWIMHEYSLNPSQFPHDFQINDYVLCRLRKNDRIMKRYKQRKTLHPQNTYSCPDLDQLKIETLSQDASLENVQNGIKLEKENVNIQKDTELENVQSTFPSEEEFFNEHEDSSPNQLPQFGAEIKQNNIEAENKNVNMQKDTKFKNIQSIITFKEASSHELDQNFSPNLSLRFVEETKQNGIATVEENVQKNSKLENIQSTVYDKNQQEDNLSVNQLLQFIDEHILEMPISTMLDDQELFFEKETNEFDDDFDSLYGLFF 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0697 390 Gene3D NAC domain 17 166 IPR036093 GO:0003677|GO:0006355
Dere10g0697 390 ProSiteProfiles NAC domain profile. 8 162 IPR003441 GO:0003677|GO:0006355
Dere10g0697 390 PANTHER NAC TRANSCRIPTION FACTOR 56 10 202 - -
Dere10g0697 390 Pfam No apical meristem (NAM) protein 10 140 IPR003441 GO:0003677|GO:0006355
Dere10g0697 390 SUPERFAMILY NAC domain 8 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0697 Dere-ChrDere10 12049494 12051106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0697 6 161 NAC Transcription Factor Family AT5G17260 36.250 3.86e-20 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere10g0697 NAM 4.5e-22 No_clan