Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0691 ATGGACAATAATAGCAGCAGAGCCGAAGCCGAACGGTGGCTATACACCGCAAATAAGCTTCTCAGCGCACGTGATCTGCACGGGGCGAGGTCCTTCGCAGTCCGAGCTCGCGAGTCCGATCCCACATTCGACGCCTCTGAGCTACTCCTTTCCGTCATCGACACCCTCCTTGCGGGTGAGAATCGGATCAACAACCTCCAGGACTGGTACGGCATACTCCAGATTATACCTTACACTAACAACATCGAGTACATCGCCAACCAGTACCGCCGTCTCGCCCTCCTCCTTGACCCGCACCGCAACCCTTTCGCGTTTTCCAACCATGCCTTCTCGCTCGTCCATGAGGCGTGGTCTGTACTCTCCAACACCGCCAAGAAGACCATGTACGACAACGAGCTGCGATTAATCACCGGACCCCCTCCTGCCCCTCCTCCGCCTCCAGCTCCGACGGCACCGGTTCATGCGCCGAACCCGATTCCTACTCCGACTCCGAACCCACCCCCGGTCCAGCGGCAACAGCAGCAGGCTCCGGCGAGGAAGAGCACGAGGACGAGAGACGGGAGGGAGGTTACCGAGGAAGAAAGGCCGAGGCCGAACATTGCCGCGACGGAGCCGACCCGGCAAGCTCAAACTGGCGAGTCAGCGGAGGCGGAAGTGAGTTCGAGTTTCTGGACGGCGTGCCCGTACTGTTACGTTATGTATGAGTACCCGAAGGCTTATGAGGATTGTACCCTAAGGTGCCAGAGCTGTAGAAGGGGGTTCCATGCGGTGAGGGTACGAACGCCGCCTGTGGCGGGGAAAGATTCATATTATTGCTGTTGGGGGTTTTTCCCGTTAGGGTTTTCAGGGAATTTCAAAGACATAAGTGGAACTACTTCCAAGTGGAACCCATTTTCTGCAATGTTTGCTTGCCCTTTGAAAGGAGGAGGAGCAGCATCCAACAGGAGATCTCAGAAAGGACCTTGGGTTTATTATGATGATGAAGCCGCGGCTGCATTCGTTGAACTTTCTGATACAAGTGAGGATGATTCTGACGATGATGATTGGAGAAGGAGTTATAATAAGAAGGCAAAGAAGAAAGCTAATAATACAAAAGTAAAAAGCTCTGGTATGGCTAGTGGTAGTGCTAGAAGGACCCCTACAGAAAGAGGTAGGAAGGGGAGCCAGAGTGGTTCAGGGCATGCTAATTTTGAAAATGGTGGGGTTGGAGATGATGGGGTGCCAAATTCTGTGAGAGCTGAATCCAGTAAAAAAGCCGCAAATAGCTCAAGGAAGAGGGGTGCGGGGAACCTGGGGAAATTAGATTTGAATGTGGAGTTTAGTAATGAGGTGGAAGAACCGGCCCCAGGAATGAGAGATGGAAATGTGGCTGGAAATGCTGAGGAAAATATTGAGGGAATTGCATTTTTTGAGGGTCTAGATGAGTTCCTTAATAGCTTACCCATTCTGAATGTTGTGGCAGATGACAAGGTTAAGGGTCACTAG 1485 0.5226 MDNNSSRAEAERWLYTANKLLSARDLHGARSFAVRARESDPTFDASELLLSVIDTLLAGENRINNLQDWYGILQIIPYTNNIEYIANQYRRLALLLDPHRNPFAFSNHAFSLVHEAWSVLSNTAKKTMYDNELRLITGPPPAPPPPPAPTAPVHAPNPIPTPTPNPPPVQRQQQQAPARKSTRTRDGREVTEEERPRPNIAATEPTRQAQTGESAEAEVSSSFWTACPYCYVMYEYPKAYEDCTLRCQSCRRGFHAVRVRTPPVAGKDSYYCCWGFFPLGFSGNFKDISGTTSKWNPFSAMFACPLKGGGAASNRRSQKGPWVYYDDEAAAAFVELSDTSEDDSDDDDWRRSYNKKAKKKANNTKVKSSGMASGSARRTPTERGRKGSQSGSGHANFENGGVGDDGVPNSVRAESSKKAANSSRKRGAGNLGKLDLNVEFSNEVEEPAPGMRDGNVAGNAEENIEGIAFFEGLDEFLNSLPILNVVADDKVKGH 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0691 494 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Dere10g0691 494 MobiDBLite consensus disorder prediction 134 215 - -
Dere10g0691 494 MobiDBLite consensus disorder prediction 181 200 - -
Dere10g0691 494 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Dere10g0691 494 Pfam DnaJ domain 68 130 IPR001623 -
Dere10g0691 494 SMART dnaj_3 67 125 IPR001623 -
Dere10g0691 494 CDD DnaJ 68 122 IPR001623 -
Dere10g0691 494 MobiDBLite consensus disorder prediction 137 171 - -
Dere10g0691 494 CDD PHD_SF 227 272 - -
Dere10g0691 494 SUPERFAMILY Chaperone J-domain 62 134 IPR036869 -
Dere10g0691 494 MobiDBLite consensus disorder prediction 336 430 - -
Dere10g0691 494 Gene3D DnaJ domain 63 137 IPR036869 -
Dere10g0691 494 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0691 Dere-ChrDere10 11978541 11980025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0691 9 493 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 41.400 5.41e-106 322