Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0663 ATGGCTTCCCTTCATCCTCCTCCTCTTCCATCTGTGGCTTGTGGTTATGAACCTAGGCACGGCTTTAGAGTTGTTCATGGTGGTCTGGATATTGAAACGACGACGTCGGAGGTGGATGGCTCAGGTGCTTCGAGTGGGAACAATAATAATGGAGGAGAAGAGTTGGGTGTATGTCTGACATGGAAGGACGTGTGGGTGACTGCTTCGAGTGGCAAGAAGAAGAAGGAGAATGGAAGCAAATCGATCCTTAAGGGTCTCACTGGTTATGCCAAGCCAGGCCAGCTCTTGGCCATTATGGGTCCTTCTGGCTGTGGCAAGTCTACTCTTCTCGATGCATTAGCAGGGAGATTAGGTTCAAACACAACGCAAACAGGAGAGATTCTCATCAATGGCCACAAACAAGTTCTGGCTTATGGAACCTCGGCATATGTGACACAAGACGACACGCTATTAACAACCCTAACTGTAAGAGAAGCAGTGCACTACTCAGCTCAGCTGCAACTACCAGACTCAATGTCAAAGGAAGAGAAGAAGGAGAGAGCAGAGTTCACAATCAGAGAAATGGGCCTTCAAGACGCCATTAACACCAGAATCGGAGGGTGGGGTTCTAAGGGAATCAGTGGAGGCCAAAAGAGAAGAGTGAGCATCTGCATAGAGATCCTCACGCGTCCCAGACTTCTCTTCCTTGATGAACCAACCAGTGGGCTTGACAGTGCAGCTTCGTACTACGTTATGAGAAGAATTGCGAGCCTCCATCAGAAGGATGGGATTCAGAGGACCATCATTGCGTCGATTCATCAGCCTAGCAGTGAAGTCTTCCAGCTTTTTGATAATCTTTGTCTTCTTTCTTCTGGTCGAACTGTGTTCTTTGGACCTGCTTCTGCTGCAAGTGAGTTCTTTGCTTCAAATGGCTTTCCTTGTCCTGCTCTTCAGAATTCGTCTGATCATTTCTTGAAAACTATAAACAAGGATTTCGATCAGGACATTGAACTGGGTTTAGCTGGAACTCGACGAAAAACCACAGAAGAAGTAATCCAGATGCTGGTGAAGTCGTACAAATCTTCTGAAATGAACCAAGAAGTTCAACGAGAAGTAGAAGTACTATCTGGACAGGATAAGAGTCCAATGGAGAAGACGAGAGGGCATGCAAGCTTCCTTACTCAAAGTCTAGTCCTTACAAAGAGATCATTTGTGAACATGCGTCGTGATGTAGGCTATTACTGGTTACGCCTTGTGATATATGTGGGTGTGGCTCTTGGTTTAGCCACTTTGTTCAACGATCTGGACACAAGCTATGGGTCTATTCAGGATCGAGGTTCACTTCTTGCGTTTGTGTGTTCATTCGTAACTTTCATGACCATTGGCGGATTCCCTTCCTTTGTGGAGGATATGAAGGTATTTCAAAGGGAAAGGCTAAACGGGCATTATGGAGTGAGCGCATATGTGATAGGAAACACCTTCTCATCAATCCCATACCTTCTTCTAGTCTCTCTCATTCCTGGAGCTATAGCCTACTACCTCCCTCACCTTCAGAGATCACTGGACCACTTCCTCTACTTCTTCTGCGTCCTCTTCTCATGTCTGATGCTCGTCGAAAGCCTCATGATGATAGTGGCTAGCATAGTCCCAAACTTCCTAATGGGCATCATAACTGGTGCTGGAATCCAAGGCATCATGATCCTCGCAGGAGGCTTCTTCAGACTGCCCCATGACCTCCCTACAGTCCTCTGGAAGTACCCTCTGTACTACGTCGCCTTCCATAGATATGCCTACCAAGGACTGTTCAAGAACGAGTTTGAAGGACTTAGGTTTGTTGGTGGTGATAGCTCGTCAAAAGGCACGACGTCGTTTGTTGGTGGTGAGGAGATTCTGAGAAGCAAGTGGGAAGTTGATATGAGCTACTCTAAGTGGGTTGATCTGGGGATATTGTTGGGTATGATCGTGTTGTATAGAGTTGTGTTCTTGGTCATTATCAAGGGTACTGAGAAGGTGAAGCCCATGCTTGCTTCTTTGATCTCTGTGCCGCCTAAAAGAGGCATGCAGGTCATGGAGATTCCTAATGCTTCTCCTTTACATACTGAAACTGTACAAATTAATTATAGCTAA 2106 0.4625 MASLHPPPLPSVACGYEPRHGFRVVHGGLDIETTTSEVDGSGASSGNNNNGGEELGVCLTWKDVWVTASSGKKKKENGSKSILKGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSNTTQTGEILINGHKQVLAYGTSAYVTQDDTLLTTLTVREAVHYSAQLQLPDSMSKEEKKERAEFTIREMGLQDAINTRIGGWGSKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMRRIASLHQKDGIQRTIIASIHQPSSEVFQLFDNLCLLSSGRTVFFGPASAASEFFASNGFPCPALQNSSDHFLKTINKDFDQDIELGLAGTRRKTTEEVIQMLVKSYKSSEMNQEVQREVEVLSGQDKSPMEKTRGHASFLTQSLVLTKRSFVNMRRDVGYYWLRLVIYVGVALGLATLFNDLDTSYGSIQDRGSLLAFVCSFVTFMTIGGFPSFVEDMKVFQRERLNGHYGVSAYVIGNTFSSIPYLLLVSLIPGAIAYYLPHLQRSLDHFLYFFCVLFSCLMLVESLMMIVASIVPNFLMGIITGAGIQGIMILAGGFFRLPHDLPTVLWKYPLYYVAFHRYAYQGLFKNEFEGLRFVGGDSSSKGTTSFVGGEEILRSKWEVDMSYSKWVDLGILLGMIVLYRVVFLVIIKGTEKVKPMLASLISVPPKRGMQVMEIPNASPLHTETVQINYS 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0663 701 Gene3D - 66 301 IPR027417 -
Dere10g0663 701 SMART AAA_5 92 286 IPR003593 GO:0016887
Dere10g0663 701 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 52 674 - -
Dere10g0663 701 Pfam ABC-2 type transporter 388 599 IPR013525 GO:0016020|GO:0140359
Dere10g0663 701 FunFam ABC transporter G family member 11 57 351 - -
Dere10g0663 701 Pfam ABC-2 type transporter 266 379 IPR043926 GO:0140359
Dere10g0663 701 ProSitePatterns ABC transporters family signature. 206 220 IPR017871 GO:0005524|GO:0016887
Dere10g0663 701 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 59 309 IPR003439 GO:0005524
Dere10g0663 701 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 298 IPR027417 -
Dere10g0663 701 Pfam ABC transporter 83 234 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0663 Dere-ChrDere10 11655277 11661554 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0663 82 244 Calmodulin-binding Proteins AT2G36910 30.000 8.06e-09 57.4