Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0662 ATGGCTTCCTTTCATCCTCCTCCTCTTCCATCTGTGGCTTTTGGTTATGAACCTAGGCACGACTTTCGAGTTGTTCATGGTGGTATGGATATTGAAACGACGACGTCAGAGGTGGATGGCTCAAGTGCTTCGAGTGGGAACAATAATAATGGAGGAGAAGAGTTGGGTGTATGTCTAACATGGAAGGACGTGTGGGTGACTGCTTCGAGTGGGAAGAAGAAGAAGGAGAATGGAAGCAAATCGATCCTTAAGGGTCTCACTACTTATGCCAAGCCAGGCCAGCTCTTGGCCATTATGGATCCTTCTGGCTGTGGCAAGTCTATTCTTCTTGATGCATTAGCAGGGAGATTAGGTTCAAACACAAGGCAAACAGGGGAGATTCTCATCAATGGCCACAAACAAGCATATGTGACACAAGACGACACCCTATTAACAACCCTAACTGTAAGAGAAGCAGTGCACTACTCAGCTCAGCTGCAACTACCAGACTCAATGTCAAAGGAAGAGAAGAAGGAGAGAGCAGAGTTCACAATCAGAGAAATGGGCCTTCAAGACGCCATTAACACCAGAATCGAAGGGTGGGGTTCTAAGGGAATCAGTGGAGGCCAAAAGAGAAGAGTGAGCATCTGCATAGAGATCCTCACGCGTCCCAGACTTCTCTTCCTTGATGAACCAACCAGTGGGCTTGACAGTGCAGCTTCGTACTACGTTATGAGAAGAATTGCGAGCCTCCATCAGAAGGATGGGATTCAGAGGACCATCATTGCGTCGATTCATCAGCCTAGCAGTGAAGTCTTCCAGCTTTTTGATAATCTTTGTCTTCTTTCTTCTGGTCGAACTGTGTTCTTTGGACCTGCTTCTGCTGCAAGTGAGTTCTTTGCTTCAAATGGCTTTCCTTGTCCTGCTCTTCAGAATTCGTCTGATCATTTCTTGAAAACTATAAACAAGGATTTCGATCAGGACATTGAACTGGGTTTAGCTGGAACTCGAGGAAAAACCACAGAAGAAGTAATCCAGATGCTGGTGAAGTCGTACAAATCCTCTGAAATGAACCAAGAAGTTCAACGAGAAGTAGAAGTACTATCTGGACAGTACAAAGTGACAAATCTAAGAGTCATGATATTGGTTAAGGTGAAGTCCAATGGAGAAGATGAGAGGGCATGCAAGCTTCATTACTCAAAGTCTAGTCCTTACAAAGAGATCATTTTGAACATGCGTCGTGATGTAGGCTATTACTGGTTACGCCTTGTGATATATGTGGGTGTGGCTCTTGGTTTAGCCACTTTGTTCAACGATCTGGACACAAGCTATGGGTCTATTCAGGATCGAGGTTCACTTCTTGCGTTTGTGTGTTCATTCGTAACTTTCATGACCATTGGCGGATTCCCTTCCTTTGTGGAGGATATGAAGGTATTTCAAAGGGAAAGGCTAAACGGGCATTATGGAGTGAGCGCATATGTGATAGGAAACACCTTCTCTTCAATCCCATACCTTCTTCTAGTCTCTCTCATTCCTGGAGCCATAGCCTACTACCTCCCTCACCTTCAGAGATCACTGGACCACTTCCTCTACTTCTTCTGCGTCCTCTTCTCATGTCTGATGCTCGTCGAAAGCCTCATGATGATAGTGGCTAGCATAGTCCCAAACTTCCTAATGGGCATCATAACTGGTGCTGGAATCCAAGGCATCATGATCCTCGCAGGAGGCTTCTTCAGACTGCCCCATGACCTCCCTACAGTCCTCTGGAAGTACCCTCTGTACTACGTCGCCTTCCATAGATATGCCTACCAAGGACTGTTCAAGAACGAGTTTGAAGGACTTAGGTTTGTTGGTGGTGATAGCTCATCAAAAGGCCCGACGTCGTTTGTTGGTGGTGAGGAGATTCTGAGAAGCAAGTGGGAAGTTGATATGAGCTACTCTAAGTGGGTTGATCTGGGGATATTGTTGGGTATGTTCGTGTTGTATAGAGTTGTGTTCTTGGTCATTATCAAGGGTACTGAGAAGGTGAAGCCCATGCTTGCTTCTTTGATCTCTGTGCCGCCTAAAAGAGGCATCCAGGTCATGGAGATTCCTAATGCTTCTCCTTTACATACAGAAACTGTACAAATTAATTATAGCTAA 2121 0.4545 MASFHPPPLPSVAFGYEPRHDFRVVHGGMDIETTTSEVDGSSASSGNNNNGGEELGVCLTWKDVWVTASSGKKKKENGSKSILKGLTTYAKPGQLLAIMDPSGCGKSILLDALAGRLGSNTRQTGEILINGHKQAYVTQDDTLLTTLTVREAVHYSAQLQLPDSMSKEEKKERAEFTIREMGLQDAINTRIEGWGSKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMRRIASLHQKDGIQRTIIASIHQPSSEVFQLFDNLCLLSSGRTVFFGPASAASEFFASNGFPCPALQNSSDHFLKTINKDFDQDIELGLAGTRGKTTEEVIQMLVKSYKSSEMNQEVQREVEVLSGQYKVTNLRVMILVKVKSNGEDERACKLHYSKSSPYKEIILNMRRDVGYYWLRLVIYVGVALGLATLFNDLDTSYGSIQDRGSLLAFVCSFVTFMTIGGFPSFVEDMKVFQRERLNGHYGVSAYVIGNTFSSIPYLLLVSLIPGAIAYYLPHLQRSLDHFLYFFCVLFSCLMLVESLMMIVASIVPNFLMGIITGAGIQGIMILAGGFFRLPHDLPTVLWKYPLYYVAFHRYAYQGLFKNEFEGLRFVGGDSSSKGPTSFVGGEEILRSKWEVDMSYSKWVDLGILLGMFVLYRVVFLVIIKGTEKVKPMLASLISVPPKRGIQVMEIPNASPLHTETVQINYS 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0662 706 Gene3D - 62 296 IPR027417 -
Dere10g0662 706 FunFam ABC transporter G family member 11 57 344 - -
Dere10g0662 706 Pfam ABC-2 type transporter 259 323 IPR043926 GO:0140359
Dere10g0662 706 Pfam ABC-2 type transporter 402 604 IPR013525 GO:0016020|GO:0140359
Dere10g0662 706 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 50 679 - -
Dere10g0662 706 SMART AAA_5 92 279 IPR003593 GO:0016887
Dere10g0662 706 ProSitePatterns ABC transporters family signature. 199 213 IPR017871 GO:0005524|GO:0016887
Dere10g0662 706 Pfam ABC transporter 83 227 IPR003439 GO:0005524
Dere10g0662 706 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 59 302 IPR003439 GO:0005524
Dere10g0662 706 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 291 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0662 Dere-ChrDere10 11625793 11631850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0662 82 237 Calmodulin-binding Proteins AT2G36910 27.907 5.24e-07 51.2