Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0660 ATGGCTTCCCTTCATCCTCCTCCTCTTCCATCTGTGGCTTGTAGTTATGAACCTAGGCACAGCTTTAGAGTTGTTCATGGTGGTCTGGATATTGAAACGACGACGTTGGAGGTGGGTGCCTCAGGTGCTTCGAGTGGGAACAATAATAATGGAGGGGAAGAGATGGGTGTATGTCTGACATGGAAGGACGTGTGGGTGACTGCTTCGAGTGGGAAGAAGGAGGAGAATGGAAGCAGATCGATCCTTAAGGGTCTCACTGGTTATGCCAAGCCAGGCCAGCTCTTGGCCATTATGGGTCCTTCTGGCTGTGGCAAGTCTACTCTTCTTGATGCATTAGCAGGGAGATTAGGTTCAAACACAAAGCAAACGGGGGAGATTCTGATCAATGGCTACAAACAAGTTCTGGCTTATGGAACCTCGGCATATGTGACACAAGACGACACTCTATTAACAACCCTAACTGTAAGAGAAGCAGTGCACTACTCAGCTCAGCTGCAACTACCAGACTCAATGTCAAAGGAAGAGAAGAAGGAGAGAGCAGACTTCACAATCAGAGAAATGGGCCTTCAAGACGCCATTAACACCAGAATCGGAGGGTGGGGGTCCAAGGGAATCAGTGGAGGTCAAAAGAGAAGACTGAGCATCTGCCTAGAGATCCTCACACGTCCCAGACTTATCTTCCTTGATGAACCAACCAGCGGGCTTGACAGTGCAGCTTCGTACTATGTTATGAGAAGAATTGCGAACCTCCATCAGAAGGATGGGATTCAGAGGACCATCATTGCGTCGATTCATCAGCCTAGCAGTGAAGTCTTCCATCTTTTTGATAATCTTTGTCTTCTTTCTTCTGGTCAAACTGTGTTCTTTGGACCAGCTTCTGCTGCGAGTGAGTTCTTTGCTACAAATGGCTTTCCTTGCCCTGCTAACCAGAACCCATCTGATTATTTCTTGAAAACTATAAACAAGGATTTCGACCAGGACATTGAACTGGGTTTAGCTGGAACTCGAGGAAAAACCACAGAAGAAGTAATCCAGATGCTGGTGAAGTCGTACAAATCTTCTGAAATGAACCAAGAAGTTCAACGAGAAGTAGAAGCACTATCCGGACAGGATAGGAGTCCAATGGAGAAGATGAGAGAGCATGCAAGCTTCATTACTCAGAGTCTTGTTCTTACAAAGAGATCATTTGTGAACATGCGTCGTGATGTAGGCTATTACTGGTTACGCCTTGTGATATATGTGGCTGTGTCTCTTGGTTTGGGCACTTTGTTCTACGACCTGGACAAAAGTGATGGGTCTATTCAGGATCGAGGTTCACTCCTTGCGTTTGTGTGTTCATTCGTAACTTTCATGACCATTGGTGGATTTCCTTCCTTTGTGGAGGATATGAAGGTGTTTCAGAGGGAAAGGCTAAACGGGCATTATGGAGTGAGTGCATATGTGATAGGAAACACCTTCTCTTCAATTCCATACCTTCTTCTAGTCTCTCTCATTCCTGGAGCTATGGCCTACTACCTCCCTCACCTTCAGAGATCACTGGACCACTTCCTCTACTTCTTCTGCGTCCTCTTCTCATGTCTGATGCTCGTCGAAAGCCTCATGATGATAGTGGCTAGCATAGTCCCAAACTTCCTAATGGGCATCATAACTGGTGCTGGAATCCAAGGCATCATGATCCTCGCAGGAGGCTTCTTCAGACTGCCCCATGACCTCCCTACAGTCCTCTGGAAGTACCCTCTACACTACGTCGCCTTCCATAGATATGCCTTCCAAGGACTGTTCAAGAACGAGTTTGAAGGACTCAGGTTTAGTCGTCATCATCATAGCTCGTCAAGACACACGACGTTGTTTGTTGGTGGTGAGAAGATTCTGAGAAGCAAATGGGAAGTTAATATGAGCTACTCTAAGTGGGTTGATCTGGGGATATTGCTGGGGATGATTGTGTTGTATAGAGTTGTGTTCTTGCTCATCATCAAGGGTACTGAGAAGGTGAAGCCCATGCTTGCTTCTTTGTTCTCTGTGCCTCCTAAAAGAAGCATACAGGTCATGGGGATTCCTAATGCTTCTCCTTTACATGGAGAGACAGTACAAATTAATTAA 2100 0.4614 MASLHPPPLPSVACSYEPRHSFRVVHGGLDIETTTLEVGASGASSGNNNNGGEEMGVCLTWKDVWVTASSGKKEENGSRSILKGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSNTKQTGEILINGYKQVLAYGTSAYVTQDDTLLTTLTVREAVHYSAQLQLPDSMSKEEKKERADFTIREMGLQDAINTRIGGWGSKGISGGQKRRLSICLEILTRPRLIFLDEPTSGLDSAASYYVMRRIANLHQKDGIQRTIIASIHQPSSEVFHLFDNLCLLSSGQTVFFGPASAASEFFATNGFPCPANQNPSDYFLKTINKDFDQDIELGLAGTRGKTTEEVIQMLVKSYKSSEMNQEVQREVEALSGQDRSPMEKMREHASFITQSLVLTKRSFVNMRRDVGYYWLRLVIYVAVSLGLGTLFYDLDKSDGSIQDRGSLLAFVCSFVTFMTIGGFPSFVEDMKVFQRERLNGHYGVSAYVIGNTFSSIPYLLLVSLIPGAMAYYLPHLQRSLDHFLYFFCVLFSCLMLVESLMMIVASIVPNFLMGIITGAGIQGIMILAGGFFRLPHDLPTVLWKYPLHYVAFHRYAFQGLFKNEFEGLRFSRHHHSSSRHTTLFVGGEKILRSKWEVNMSYSKWVDLGILLGMIVLYRVVFLLIIKGTEKVKPMLASLFSVPPKRSIQVMGIPNASPLHGETVQIN 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0660 699 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 59 308 IPR003439 GO:0005524
Dere10g0660 699 Gene3D - 59 300 IPR027417 -
Dere10g0660 699 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 52 673 - -
Dere10g0660 699 Pfam ABC transporter 82 233 IPR003439 GO:0005524
Dere10g0660 699 CDD ABCG_EPDR 56 290 - -
Dere10g0660 699 FunFam ABC transporter G family member 11 57 350 - -
Dere10g0660 699 SMART AAA_5 91 285 IPR003593 GO:0016887
Dere10g0660 699 Pfam ABC-2 type transporter 387 598 IPR013525 GO:0016020|GO:0140359
Dere10g0660 699 ProSitePatterns ABC transporters family signature. 205 219 IPR017871 GO:0005524|GO:0016887
Dere10g0660 699 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 299 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0660 Dere-ChrDere10 11596000 11601162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0660 92 269 Calmodulin-binding Proteins AT2G36910 28.649 1.55e-08 56.2