Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0650 ATGGATAATCTTTGTTGCTTCAACTCTGTCACTCAGGTGGTTGGAGGACGGTCATCATGTAACTCCGGCAAGGGAAGGAGCCATCAGAATCCTGTCAAGTATGGCTTTAGCCTTGTTAAAGGGAAAGCAAACCACCCCATGGAGGACTATCATGTAGCAAAGTTTGTCCATGTCCGAGGGCAAGAGCTTGGACTTTTTGCTATATATGATGGGCACTTGGGAGACAGTGTGCCAGCCTATCTACAAAAGAATCTCTTCTCTAATATCTTAAAGGATGATGACTTCTGGACTGATACGGCCAGGTCCATTGTAAAAGCTTATGAGACAACCGATCAGGCAATTCTTTCTCATAGTCCTGATTTAGGACGAGGTGGATCAACTGCAGTGACTGCAATTCTTGTGAACAATCATAAGTTATGGATAGCTAATGTGGGAGATTCACGAGCAGTTCTGTCAAAGGGTGGACAGGCTATACAGATGAGTATAGATCACGAGCCCAATACTGAGAGGGACAGCATTGAGGACAGAGGTGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGAGTGAATGGCCAGCTTGCAGTTTCTCGAGCATTCGGAGACAAAAATCTCAAAACGCACCTGCGATCTGATCCTGACATACAGCAGGCTAACATCGACCCAGAGACAGAGCTTTTGATTCTTGCAAGTGATGGTCTATGGAAGGTAATGGCAAATCAAGAAGCAGTTGATATTGCAAGAAAAATAAAGGATCCACAAAGGGCAGCTAAACAACTAGCAGCTGAAGCATTGAACAGAGAAAGCAAGGATGATATTTCTTGCATTGTAGTTCGTTTCAAGGCATGA 849 0.4441 MDNLCCFNSVTQVVGGRSSCNSGKGRSHQNPVKYGFSLVKGKANHPMEDYHVAKFVHVRGQELGLFAIYDGHLGDSVPAYLQKNLFSNILKDDDFWTDTARSIVKAYETTDQAILSHSPDLGRGGSTAVTAILVNNHKLWIANVGDSRAVLSKGGQAIQMSIDHEPNTERDSIEDRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIQQANIDPETELLILASDGLWKVMANQEAVDIARKIKDPQRAAKQLAAEALNRESKDDISCIVVRFKA 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0650 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Dere10g0650 282 CDD PP2Cc 32 280 IPR001932 -
Dere10g0650 282 SMART PP2C_SIG_2 44 280 IPR001932 -
Dere10g0650 282 SMART PP2C_4 29 278 IPR001932 -
Dere10g0650 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Dere10g0650 282 PANTHER PROTEIN PHOSPHATASE 28 280 IPR015655 GO:0004722|GO:0006470
Dere10g0650 282 SUPERFAMILY PP2C-like 26 281 IPR036457 -
Dere10g0650 282 FunFam Probable protein phosphatase 2C 39 23 281 - -
Dere10g0650 282 Gene3D - 17 282 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0650 Dere-ChrDere10 11464289 11470818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0650 1 281 PP2C-type Phosphatase Gene Family AT1G22280 73.171 4.90e-154 429