Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0648 ATGCGTGATTTTGGAGGTCGTGGGTCCCCATTGGAGACTTTTCTTACAGTGCCGAATAGATTCACGTGGATACGAAGACGGACCGGTGTTTCACTTTCTCACGTCACTTGCGAGAAGCTGACTGGAAGGAGCAGTAGGAAGGAGGAAACTTTTACAGGCTTCATAATCATCCCCGTCTCCGCGTTGATCTCTGATTCAGTCTTCGTCATGGCGGAGCGAGCTTCTTACGGAGTTGGTCCTCGATTAGATATTCAGCAATTACAATTTGAAGCACAGCATAGGTGGTTGCGACCTGCTGAAATATGTGAAATTTTACGTAATTATCGGATGTTTCAGATCACATCAGAACCTCCAAACAGGCCCCCAAGTGGTTCTCTTTTTCTTTTTGATCGGAAGGTGTTGAGATATTTTAGAAAGGATGGACATAATTGGAGAAAGAAAAAAGATGGAAAGACAGTTAAGGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTGTTACACTGCTACTATGCCCATGGGGAAGAAAATGAAAATTTTCAGAGGCGAAGCTATTGGATGCTTGAACCGGAGATGATGCACATAGTTTTTGTCCACTACTTGGAAGTAAAGGGTAACAAAACAAATATTGGAGGAAACACAGATAGTGATGAGGTTACATCAGATTCCCAGAAGAGCAGATCTCCATCATCTGGTTTTGCTACCAATTATAGTAATGTGCCGTCAAGAAGTACAGATGCCATGAGCCCAACTAGCACTTTGTCTTCCTTATGTGAAGATGCTGATTCAGGTGATCATGGGCAGTCATCAATTTCTGGAACAAATTACAGCCCACTTGTGCCGGGAGACAAATCTAGAGGAAACAATACTTCTTTCGTTGAGGGTCATGTTGTGCATGGCATGACCTCCTGGGATGGCGTCCTGGACCAAAGTTCTGCTGGATTACATACTGATCCTTCTCTTGTAACATTTCCCTCCATCCCATCCTATTCAGTAGGAAACGTCCTTGATCAAGAACATAGTGTTCTGGGTGACCTTTTGACAAGCGAGGGTGCCCTCATTGAGGAGGCAGGGACATCTCATTCTCTCAAATCAAATTGGCAGATTCCATTTGAAGACAATTCAGGACAGTTGCCCAAATGGCCAATAAATCAATTGTTGAGTTCTGAATTTGGATCTGATTTTAGCACTGGTTTGCTAGAGCATGAATCTCATAATGCGAGTCCTGAAATTGCTCCTGACCTGTTAACTTTTAATGGCCAGTCAAGAGAGCAGCCTCTGCAGGAAAACTTCTCAAAACAGCATACTGATACACAATCTCAAATTTCTCTGAAATATAATTCTGAGAATGAAGTTCCTTCAGAAGAAAGTATTAACTATGCCTTGACTATGAAACGCTCATTATTAGATGGAGAGGATAGCCTGAAGAAAGTTGACAGCTTTTCTCGTTGGGTTAGTAGAGAGCTTGCAGAGGTGGATGATCTGCGTATGCAGTCCTCACCTGGTATATCCTGGAACACAGATGAATGTGGGCAAGTTATAGATGATTCTTCGTTGAGTCCCTCCCTCTCTCATGACCAGCTGTTTAGCATATATGATTTTTCACCTAAATGGGCTTATGCTGAATCTGAAACTGAGGTTTTGATCATTGGAACATTTTTGAAGAGTCAACCAGAGGTGGCAAACTGCCACTGGTCATGTATGTTTGGGGAAGTTGAAGTTCCTGCTGAGGTTTTAGCCAATGGAATTCTGTGTTGTCTTGCTCCACCTCATAACATTGGAAGGGTCCCCTTTTATGTAACATGTTCCAATAGGTTAGCATGTAGTGAAGTGAGGGAATTTGATTACAGAGAGGGCTTTGCTAAAGAAGTAGAAGTGGAAGATTTTTACAGCAGTTCATTTGAAATGCTGCTATATTTGCGATTGGAGAAGTTACTTTCTTTAAAATCAGTGCACCCATCAAATGACAAGTCTTTTGACAGTGATACAGAGAAGAGGAGCTTGATTTATAAGCTTATTTCATTGAAGGAGGAAGAGGAGTTTTCAAATAAAGAAGAAAAGACTTTAGATATGGATTTATCCCAAGACAAGGTGAAGGAGCATCTATTTCGCTGGCAGGTGAAAGAGAAGCTGTACTCATGGCTACTTCACAAAGTAGCTGAAGATGGTAAAGGGCCAAATGTATTAGATGAGGATGGACAAGGTGTGCTACATTTAGCAGCTTCTCTTGGTTATGATTGGGCCATAGCACCAATTATAATTTCTAGGGTTAATATCAATTTCCGGGATGTGAATGGATGGACAGCTCTGCATTGGGCTGCCTCCTGTGGCAGAGAGCGAACAGTTGCTCTCCTTGTCACCATGGGAGCTGCCCCAGGAGCATTGACAGATCCATCTCCAGCATTTCCTTCAGGTAGAACACCAGCTGATCTTGCTTCTAGCAATGGACATAAGGGAATCTCTGGCTTCCTTGCAGAGTCTTCATTAACTAGCCACCTTGCCTCCCTCACGATGGATGATCTAAAGGAAGATGGTGGTCAAGAATCTACAGGAATAAAAGCAGTACAGACTGTTTCAGAACGTTCTGCGACACCTTTGTTTTGTGGTGACATACCAGATGCCCTATGCCTTAAGGATTCTCTTACAGCTGTTCGTAATGCTACACAAGCTGCTGACCGTATACATCAAGTATTTAGAATGCAGTCATTCCAGAGGAAGCAGTTAAATCAATATGAAGATGATGAGTTTGGATTGTCAGATCAGCGAGCTCTTTCACTTCTAGCTTCTAAGGCTGGCAAGGCTGGACTGGGAGATGGGTTAGCCCATGCTGCTGCAACACAAATACAAAAGAAGTTCCGTGGTTGGAAGAAGAGAAAAGAATTCCTAATAATTCGTCAAAGAATTGTTAAAATCCAGGCCCATGTAAGAGGGCATCAGGTAAGGAAGCAGTATAAGTCAATCATCTGGTCCGTAGGAATCCTGGAGAAGGTCATATTGCGTTGGAGACGCAAGGGCAGTGGTTTACGTGGATTTCGACCTGATGCTGCTAGCAGGGAAGCCAGCCAACCAAGCGAAACTTTGAAAGAAGATGATTATGATTTTCTCAAGGAAGGAAGGAAACAAAGTGAGGAAAGGTTCCAAAAGGCCCTTTCGAGGGTAAAGTCCATGGTTCAGTATCCAGAGGCTCGGGCTCAATATCGGCGGCTGCTAAATGTTGTTGAGGACGTCCGTCAAACCAAGGCATGCAATATGGACTTGACCAATTCAGAAGAGACTGTGGATGGTGTAGAGCAGCTGATTGATATTGACATGCTTTTAGATGACAATTTCATACCCATAGCATTTGATTGA 3354 0.4305 MRDFGGRGSPLETFLTVPNRFTWIRRRTGVSLSHVTCEKLTGRSSRKEETFTGFIIIPVSALISDSVFVMAERASYGVGPRLDIQQLQFEAQHRWLRPAEICEILRNYRMFQITSEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEPEMMHIVFVHYLEVKGNKTNIGGNTDSDEVTSDSQKSRSPSSGFATNYSNVPSRSTDAMSPTSTLSSLCEDADSGDHGQSSISGTNYSPLVPGDKSRGNNTSFVEGHVVHGMTSWDGVLDQSSAGLHTDPSLVTFPSIPSYSVGNVLDQEHSVLGDLLTSEGALIEEAGTSHSLKSNWQIPFEDNSGQLPKWPINQLLSSEFGSDFSTGLLEHESHNASPEIAPDLLTFNGQSREQPLQENFSKQHTDTQSQISLKYNSENEVPSEESINYALTMKRSLLDGEDSLKKVDSFSRWVSRELAEVDDLRMQSSPGISWNTDECGQVIDDSSLSPSLSHDQLFSIYDFSPKWAYAESETEVLIIGTFLKSQPEVANCHWSCMFGEVEVPAEVLANGILCCLAPPHNIGRVPFYVTCSNRLACSEVREFDYREGFAKEVEVEDFYSSSFEMLLYLRLEKLLSLKSVHPSNDKSFDSDTEKRSLIYKLISLKEEEEFSNKEEKTLDMDLSQDKVKEHLFRWQVKEKLYSWLLHKVAEDGKGPNVLDEDGQGVLHLAASLGYDWAIAPIIISRVNINFRDVNGWTALHWAASCGRERTVALLVTMGAAPGALTDPSPAFPSGRTPADLASSNGHKGISGFLAESSLTSHLASLTMDDLKEDGGQESTGIKAVQTVSERSATPLFCGDIPDALCLKDSLTAVRNATQAADRIHQVFRMQSFQRKQLNQYEDDEFGLSDQRALSLLASKAGKAGLGDGLAHAAATQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQYKSIIWSVGILEKVILRWRRKGSGLRGFRPDAASREASQPSETLKEDDYDFLKEGRKQSEERFQKALSRVKSMVQYPEARAQYRRLLNVVEDVRQTKACNMDLTNSEETVDGVEQLIDIDMLLDDNFIPIAFD 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0648 1117 MobiDBLite consensus disorder prediction 212 291 - -
Dere10g0648 1117 Pfam CG-1 domain 90 203 IPR005559 GO:0003677
Dere10g0648 1117 FunFam Calmodulin-binding transcription activator 2 941 989 - -
Dere10g0648 1117 Gene3D - 694 837 IPR036770 -
Dere10g0648 1117 SMART ANK_2a 805 834 IPR002110 GO:0005515
Dere10g0648 1117 SMART ANK_2a 766 795 IPR002110 GO:0005515
Dere10g0648 1117 Gene3D Immunoglobulins 525 620 IPR013783 -
Dere10g0648 1117 Pfam IQ calmodulin-binding motif 967 986 IPR000048 GO:0005515
Dere10g0648 1117 Pfam IQ calmodulin-binding motif 943 962 IPR000048 GO:0005515
Dere10g0648 1117 ProSiteProfiles Ankyrin repeat region circular profile. 766 791 - -
Dere10g0648 1117 SUPERFAMILY Ankyrin repeat 722 827 IPR036770 -
Dere10g0648 1117 ProSiteProfiles CG-1 DNA-binding domain profile. 84 210 IPR005559 GO:0003677
Dere10g0648 1117 SMART iq_5 941 963 IPR000048 GO:0005515
Dere10g0648 1117 SMART iq_5 964 986 IPR000048 GO:0005515
Dere10g0648 1117 Pfam IPT/TIG domain 532 610 IPR002909 -
Dere10g0648 1117 ProSiteProfiles IQ motif profile. 965 989 IPR000048 GO:0005515
Dere10g0648 1117 Pfam Ankyrin repeats (3 copies) 738 827 IPR002110 GO:0005515
Dere10g0648 1117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 942 992 IPR027417 -
Dere10g0648 1117 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 83 1080 - -
Dere10g0648 1117 ProSiteProfiles Ankyrin repeat profile. 766 798 IPR002110 GO:0005515
Dere10g0648 1117 SMART CG_1_2 87 205 IPR005559 GO:0003677
Dere10g0648 1117 Gene3D - 942 989 - -
Dere10g0648 1117 FunFam Calmodulin-binding transcription activator 2 525 621 - -
Dere10g0648 1117 SUPERFAMILY E set domains 532 618 IPR014756 -
Dere10g0648 1117 ProSiteProfiles IQ motif profile. 942 971 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0648 Dere-ChrDere10 11415576 11428137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0648 70 1099 CAMTA Transcription Factor Family AT5G64220 54.017 0.0 1069
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Dere10g0648 CG-1 3.1e-51 No_clan