Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0641 ATGGATTCTTCTTCCTTGTCTCTGTCAACTATGCACATGGCGCTTTCCATTTCAAACCAGAGCCACCTCACATCGACCCAACTCCTCCATCGCCCCCTCAAATGCTTTCCTTACGGCTACAACAGTCCCACCTCCTCGCCGGGGACCTTCTCTGCACTGGCCCTCACAAAACGCCGTCGTTTTCGATGGCTTTCGGCCTCCGCTGCTTCTGGAGATGTTAATTCCGAAGGGGCTGATGAACTTTCGGCACTCTCATCTGAAGTTGTTGTTCTCGATGTTGGGGGAATGATGTGCGAGGGTTGTGCAGCTAGTGTGAAAAGACTTCTGGAGAGTCAGCCTCAAGTGTCATCTGCTAGTGTTAATCTAACCACAGAGACAGCAACAGTTTGGCCGGTGTCTGAAGCAAAGACTGTATCAAATTGGCACAATCAATTAGGAGGGGCACTTGCAGAGCATTTAACTAACTGCGGTTTCAAGTCTAGCCTTTCAAGGTAG 495 0.499 MDSSSLSLSTMHMALSISNQSHLTSTQLLHRPLKCFPYGYNSPTSSPGTFSALALTKRRRFRWLSASAASGDVNSEGADELSALSSEVVVLDVGGMMCEGCAASVKRLLESQPQVSSASVNLTTETATVWPVSEAKTVSNWHNQLGGALAEHLTNCGFKSSLSR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0641 164 FunFam Copper-transporting ATPase PAA1, chloroplastic 87 162 - -
Dere10g0641 164 ProSitePatterns Heavy-metal-associated domain. 93 122 IPR017969 GO:0046872
Dere10g0641 164 SUPERFAMILY HMA, heavy metal-associated domain 87 136 IPR036163 GO:0046872
Dere10g0641 164 ProSiteProfiles Heavy-metal-associated domain profile. 87 161 IPR006121 GO:0046872
Dere10g0641 164 Pfam Heavy-metal-associated domain 90 158 IPR006121 GO:0046872
Dere10g0641 164 CDD HMA 90 161 IPR006121 GO:0046872
Dere10g0641 164 Gene3D - 87 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0641 Dere-ChrDere10 11264330 11265932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0641 72 161 Primary Pumps ATPases AT4G33520 62.222 1.22e-36 124