LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere10g0640	ATGGCTGAGGAGGGGGATCCAGAGAGAGGTGAAATCAATGGTGGATTCTCGATGGACTCCACCGAATCCAGGTGGGTTTTCCAGGAGGACGAGGATGATTCGGAGATAGAGGACGATGAGGGAGGTTCGCGGCACCAGTGCATGTTGGACTCGGAGGATGAGGAAAATGGTGAGCAGAGGCTAATTCGGACTGGCCCGCGAATCGATTCATTCGATGTTGAAGCTCTTGAGGTTCCCGGTGCTCAGAGAAATGACTATGAGGATGTCAGTGTGGGAAGGAGAGTAGTATTAGCTTTTCAGACCCTCGGTGTTGTCTTTGGTGATGTTGGAACAAGTCCTTTGTATACTTTCAGTGTTATGTTTAGAAAGGCTCCTATTAATGGAAATGAAGACATTCTTGGAGCATTATCACTTGTTCTGTATACCTTGATCTTGATTCCTCTTGTGAAGTATGTCTTGGTTGTTTTGTGGGCCAATGATGATGGTGAAGGTGGTACTTTTGCCTTGTACTCTTTGATTTGTCGTCATGCTAAGGTCAGTCTTCTGCCCAATCAGTTGCCATCAGATGCCCGAATATCAAGCTTTAGGCTAAAGGTTCCATCCCCTGAGCTTGAAAGGTCACTAAAAATCAAGGAGAGACTGGAGACTTCACTGACTCTGAAGAAGATTCTACTTATATTGGTGCTTGCTGGTACTTCTATGGTGATAGCTAATGGGGTAGTTACACCAGCAATGTCAGTATTGTCATCTGTTGGTGGTTTAAGAGTTGGGGTAGATGCAATTGAACAAGATGAAGTGGTGATGATCTCTGTTGCCTGCCTTATTGTTTTGTTTAGTGTACAGAAGTATGGAACTAGTAAAGTGGGACTTGCTGTGGGACCTGCTTTATTCCTATGGTTTTGTTCTCTGGCGGGCATTGGGATCTACAATCTCATCAAATATGACATCACTGTCTTGAGGGCATTTAATCCAATTCATATATATTACTTCTTCCAGAGGAATTCAACTACAGCATGGTATTCTCTTGGGGGTTGTCTTCTTTGTGCAACCGGTTCTGAGGCCATGTTCGCAGATCTTTGCTACTTCTCTGTACGATCAGTTCAGCTTTCTTTTGTCTTTCTTGTTTTGCCATGCCTATTATTGGGTTATTTGGGTCAAGCTGCATACCTTATGGAAAACCATGCTGATGCTGGTCAGGCGTTTTTTTCTTCTGTTCCAAGTGGTGCATTCTGGCCAGTTTTCCTCATTGCTAACATTGCAGCGCTAATTGCAAGTCGTGCTATGACAACAGCCACATTTTCATGTATAAAACAATCAACTGCACTTGGCTGTTTCCCTCGTCTTAAAATCATCCACACTTCTCGGAAATTTATGGGCCAGATCTACATACCTGTCATAAACTGGTTTCTTTTGGCTGTTTCCCTGGTGTTTGTCTGCTCTATATCCAGCATTGATGAGATTGGGAATGCATATGGCATTGCTGAGATTGGGGTGATGATGATGACCACTATTTTAGTAACCCTTGTTATGCTTCTTATATGGCAGATACACATCATCATAGTGCTGAGTTTTGTGGTAGTGTTCTTGGGATTGGAATTAATTTTCTTTTCATCAGTTTTGTGGAGTGTTACAGATGGAAGTTGGATAATATTGGTCTTTGCCATAATAATGTTTCTTATAATGTATATATGGAATTATGGAAGCAAGCTCAAGTATGAAACTGAAGTCAAGCAAAAGCTGTCAATGGATTTGATGCGAGAATTAGGTTGCAATCTTGGGACAATACGAGCTCCTGGTATTGGGTTGCTCTATAATGAGTTGGTTAAAGGAATTCCGGCAATTTTTGGCCATTTTCTGACCACGCTTCCAGCAATACACTCAATGATTATATTTGTGTGTATCAAGTATGTTCCAGTTCCTGTTGTGCCTCAGAGTGAAAGGTTCCTTTTCAGGCGGGTCTGCCCAAAAAGCTACCATATATTTCGTTGTATTGCCAGATATGGTTATAAAGATGTTCGCAAAGAAAATCACCAGGCTTTTGAGCAGTTGCTGATTGAGAGCCTAGAGAAGTTTATACGTCGAGAGGCTCAGGAACGGTCACTGGAAAGTGATGGAGATGATGATTCAGATTCAGAGGAAGAGTATTCTGCTTCAAGGGTTCTCATAGCTCCCAATGGGAGTGTATACTCACTTGGTGTTCCTCTTCTGGCTGATTTCCAGGATACCCACAACCCCATTTCGGATGCAAGCACATCACAGGAGGTGAATTCAGCGCCCTCTAATGCCCCAGTGTTTGATGCCGAGCAGAGTCTTGAAAGGGAGCTGTCTTTTATACGCAAGGCAAAAGAATCTGGAGTCGTTTATCTTCTTGGTCATGGGGATATAAGGGCAAGGAAGAATTCCTGGTTTATAAAGAAGCTAGTTATTAACTATTTTTATGCTTTCTTGAGGAAGAACTGCAGGAGGGGGATCACAACTTTGAGCGTACCCCACTCACATCTGATGCAGGTTGGCATGACTTACATGGTTTGA	2532	0.4289	MAEEGDPERGEINGGFSMDSTESRWVFQEDEDDSEIEDDEGGSRHQCMLDSEDEENGEQRLIRTGPRIDSFDVEALEVPGAQRNDYEDVSVGRRVVLAFQTLGVVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILIPLVKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDARISSFRLKVPSPELERSLKIKERLETSLTLKKILLILVLAGTSMVIANGVVTPAMSVLSSVGGLRVGVDAIEQDEVVMISVACLIVLFSVQKYGTSKVGLAVGPALFLWFCSLAGIGIYNLIKYDITVLRAFNPIHIYYFFQRNSTTAWYSLGGCLLCATGSEAMFADLCYFSVRSVQLSFVFLVLPCLLLGYLGQAAYLMENHADAGQAFFSSVPSGAFWPVFLIANIAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVINWFLLAVSLVFVCSISSIDEIGNAYGIAEIGVMMMTTILVTLVMLLIWQIHIIIVLSFVVVFLGLELIFFSSVLWSVTDGSWIILVFAIIMFLIMYIWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSMIIFVCIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERSLESDGDDDSDSEEEYSASRVLIAPNGSVYSLGVPLLADFQDTHNPISDASTSQEVNSAPSNAPVFDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKNSWFIKKLVINYFYAFLRKNCRRGITTLSVPHSHLMQVGMTYMV	843

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere10g0640	843	MobiDBLite	consensus disorder prediction	1	58	-	-
	Dere10g0640	843	MobiDBLite	consensus disorder prediction	39	58	-	-
	Dere10g0640	843	Pfam	K+ potassium transporter	98	671	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Dere10g0640	843	NCBIfam	potassium uptake protein	97	843	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Dere10g0640	843	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	93	841	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere10g0640	Dere-ChrDere10	11245958	11261295	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere10g0640	1	843	Inorganic Solute Cotransporters	AT5G09400	80.210	0.0	1347