Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0629 ATGGGGTCTCCACATTTTGTTCTTAAACATATTCTCTTCGCAGTTCTTCTTGCATTACTATTGAATACACTTGTCATAGCTCAACAAGGTCCTCTTGGTAACCCTGCAGAGAAAGATGCTCTTTATGGTCTCAAGGCCACTTTCAATGACCCTTTTCTGAATAGTAATTGGATTGGCTTCCCCTGCAACGGGACTGTACCATCAAGATGGATTGGGATTCAGTGTACCAAAGGTCGAGTCACTGGTATAGTATTGGAAAATATGGGGCTAACTGGAAAAATTGATGTCAGAGCATTCTTCAACCTTGAAGAATTGTCTATTTTGAACTTAAGGTACAATTTCCTGAAGGGAAATTTTCTGGATTTCTCCAACAATCACCAGTTGAAGTACATTGACTTGTCAGGCAACAAGTTTGATGGGCCAATATCAAGGTCCCTTCTAAATCTCAACCTCTTGGAAACGTTGTTTCTTCAAGGTAACAAGCACACAGGTCCAATACCAGAGTTTAGTCAACCAAGTTTGAAGATGATCAATGTCTCAAACAATAATCTTCGGGGTAGAATCCCAACAACTCAGATTCTTCAGTCATTAGGCCCTGATTCATTTTCTGGCAACCACAGAATATGTGGTCCTCCTTCTCTCAATTCCTGCAGCCTTAACTTGAAATCTCCTGTTCCAGCACCTGCAAGTGACCCAGAAAACTATGAAGCCCAGAACCAGAATGAATCTTCAGACAAAGATAACGAATCTTCAGATAACGATCACATTTTTCCAATTCTAATTATTTTCAATGTGGTTCTTCTGATTGCAATACTCTTACTAGTGGTTCTTTACTTCAACACAATTAAAAAGGTCAACAACATTCTGAAGAGGCAGATTCCCATAGATAAAGATGTGGTGGAGACCGTTGACAAGAAGGTGGAAATGGGAGACCATCAGGGGCCAGTGATGGCAGTAGAAGAGAGAAAGGAGCTTATATTCTTTGAGGATGAACCGAAGTTTCAAATGAACGAACTTTTCAAAGCTTCTGCTGAGGCATTGGGTCAGGGAATTATGGGTAATAGTTATAAGGCTATGCTAAGTAGAGGACCTTCCATCGTTGTAAAGCGGCTGAGGGACTTGAAGCCAATGACAAGGGAGGAGTTTGCAAAGCAACTGCATATGATTGCTCATCTGAAGCACCCAAATTTGTTGCCTTTGCTTGCTTACTACCATTCCAAAGATGAGAGGTTGCTGCTATACCGATATGCAGAGAAAGGCAGTCTTTTCTCTCGGCTTCATGAAAACAGAACTGGAAACCGTGTTCCATTCCAATGGTACTCAAGATTGTTAGTGGCAAGAGGGGTAGCACGAGCATTAAGTTACCTGCATCTGAACGCCAAGTCCCAGAATGTCGTCCCCCATGGCAACCTGAAGTCCTCCAATGTCCTCGTAGGCGAAAACAACACAGTCCTCGTCTCTGACTATGGCCTTTCCTCCCTCATAGCACAACCCATTGCAGCTCAGCGCATGGTCATTTACAAATCACCCGAATATGGGTACGCCAAAAAAGTCACGAAGCAATCCGATGTGTGGAGCTATGGAAGCCTTCTCATAGAACTTTTAACAGGCAGATTATCTGTGTGCTCGGCCCCACATGGGGTGAACGGGTCGGACCTCTGTAGTTGGGTTCACAGGGCAGTAAGGGAAGAATGGACAGCTGAGATATTCGACAAAGAAATTTCTGTGCAGAGAAGTGCTCTTCCTGGGATGCTGAGATTGCTCGAGATTGCAATGCGTTGCACCAATAGACACCCAGAGAATCGCCCCGATATGAGGGAGGTAGTGAGAGAAGTGGAGAAGATAGAGGCTCCATTGGCATCAGAAGATGAAGAAGATGCATCTGGGGAGAGGTCTACGACAGATGATTCTCTCTCAACTAGTAACTCAGGGATTATTGGAGACGAGAGATAG 1953 0.4383 MGSPHFVLKHILFAVLLALLLNTLVIAQQGPLGNPAEKDALYGLKATFNDPFLNSNWIGFPCNGTVPSRWIGIQCTKGRVTGIVLENMGLTGKIDVRAFFNLEELSILNLRYNFLKGNFLDFSNNHQLKYIDLSGNKFDGPISRSLLNLNLLETLFLQGNKHTGPIPEFSQPSLKMINVSNNNLRGRIPTTQILQSLGPDSFSGNHRICGPPSLNSCSLNLKSPVPAPASDPENYEAQNQNESSDKDNESSDNDHIFPILIIFNVVLLIAILLLVVLYFNTIKKVNNILKRQIPIDKDVVETVDKKVEMGDHQGPVMAVEERKELIFFEDEPKFQMNELFKASAEALGQGIMGNSYKAMLSRGPSIVVKRLRDLKPMTREEFAKQLHMIAHLKHPNLLPLLAYYHSKDERLLLYRYAEKGSLFSRLHENRTGNRVPFQWYSRLLVARGVARALSYLHLNAKSQNVVPHGNLKSSNVLVGENNTVLVSDYGLSSLIAQPIAAQRMVIYKSPEYGYAKKVTKQSDVWSYGSLLIELLTGRLSVCSAPHGVNGSDLCSWVHRAVREEWTAEIFDKEISVQRSALPGMLRLLEIAMRCTNRHPENRPDMREVVREVEKIEAPLASEDEEDASGERSTTDDSLSTSNSGIIGDER 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0629 650 MobiDBLite consensus disorder prediction 633 650 - -
Dere10g0629 650 Gene3D Transferase(Phosphotransferase) domain 1 418 638 - -
Dere10g0629 650 ProSiteProfiles Protein kinase domain profile. 341 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0629 650 SUPERFAMILY L domain-like 35 212 - -
Dere10g0629 650 Gene3D Ribonuclease Inhibitor 34 219 IPR032675 -
Dere10g0629 650 MobiDBLite consensus disorder prediction 613 650 - -
Dere10g0629 650 Pfam Protein tyrosine and serine/threonine kinase 345 611 IPR001245 GO:0004672|GO:0006468
Dere10g0629 650 MobiDBLite consensus disorder prediction 220 251 - -
Dere10g0629 650 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 617 IPR046959 -
Dere10g0629 650 SUPERFAMILY Protein kinase-like (PK-like) 345 616 IPR011009 -
Dere10g0629 650 Gene3D Phosphorylase Kinase; domain 1 313 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0629 Dere-ChrDere10 11098989 11101492 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0629 56 645 Receptor kinase-like Gene Family AT3G08680 34.671 1.50e-98 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere10g0629 PK_Tyr_Ser-Thr 2.7e-31 CL0016