Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0627 ATGTGGCCATCTTTGGTGGCACAGGTTCCAGGGACGAGGTTTGTTCCTAAAGATGCTGAACTTGTTACATATTATCTTTACGGGAAGGTGACAGGACAAACACTACCAGAAGGAGTCATTATTGAATGCGATCTTTATGGGAATGAGAACCCATGGGATATATGGAAATGCTACAATGAGAAGGTGGTCAGGTCGTCAGAGGGAGAAGACTTATACATGTTCACAAGACTGAAGAGAAAGAACCCTACGGCTAAGCGTGTGGAGAGAAAGGTGGGGATAGGGACATGGCAAGGAGAAGCCATTGGAAAGCAGATTATGGTTCCTGGGATTGATCAATGTGTGGGATTCATGAAGAGATTTCGATTTGAGATGAGTCAAACTCATCACGATGGTGCATGGATCATGCACGAGTACTCTCTTAATCCCTCTCAATTTCCTCATGATTTCCAGATTAACGATTATGTTCTCTGTCGGCTTAGAAAGAATGATAGAATTATGAAAAGGTATAAACAAAGAAAAACATTACACCCTCTGAATACATATTCATGTCCTGACTTGGATCAATTAAAAATGGAAACGGTGTCACAAGATACTTCACTAGAAAATGTGCAAAATGGTATAAAACTAGAGAAGGAAAATGTGAATATACATAAGGACACTGAATTAGAGAATGTTCAATCGACCTTTCCTAGTGAAGAAGAATTTTTAAATGAATATGAAGATAGTTCTCCTAATCAATTGCCTCAATTTGGAGCGGAGATCAAACAAAGCAACATAGAAGCAGAAAACAAAAATGTGAATATGCAAAAGGACACCAAGTTTAAGAACATTCAATCAATCATCACTTTTAAAGAAGCATCTTCCCATGAACTAGATCAAAATTTTTCTCCTAATCTGTCACTTCCATCTGTAGAAGAGACGAAACAAAATGGCATAGCAACAGTCGAAGAAAATGTGCAGATGAACAACAAATTAGAGAACGCCCAATCAACTGTTTATGATGAAAATCAACTAGAAGATAATTTTTCTGTTAACCAATTGCTTCAATTTGATGATGAACATATTCTAGAGATGCCTATATCTACCATGCTGGATGATCAAGAACTCTTTTTTGAAAAAGAGATGAACGAATTTGATGATGACTTTGACTCATTGTACGGCTTATTCTTTTAA 1173 0.3717 MWPSLVAQVPGTRFVPKDAELVTYYLYGKVTGQTLPEGVIIECDLYGNENPWDIWKCYNEKVVRSSEGEDLYMFTRLKRKNPTAKRVERKVGIGTWQGEAIGKQIMVPGIDQCVGFMKRFRFEMSQTHHDGAWIMHEYSLNPSQFPHDFQINDYVLCRLRKNDRIMKRYKQRKTLHPLNTYSCPDLDQLKMETVSQDTSLENVQNGIKLEKENVNIHKDTELENVQSTFPSEEEFLNEYEDSSPNQLPQFGAEIKQSNIEAENKNVNMQKDTKFKNIQSIITFKEASSHELDQNFSPNLSLPSVEETKQNGIATVEENVQMNNKLENAQSTVYDENQLEDNFSVNQLLQFDDEHILEMPISTMLDDQELFFEKEMNEFDDDFDSLYGLFF 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0627 390 Pfam No apical meristem (NAM) protein 10 140 IPR003441 GO:0003677|GO:0006355
Dere10g0627 390 Gene3D NAC domain 17 166 IPR036093 GO:0003677|GO:0006355
Dere10g0627 390 ProSiteProfiles NAC domain profile. 8 162 IPR003441 GO:0003677|GO:0006355
Dere10g0627 390 PANTHER NAC TRANSCRIPTION FACTOR 56 10 192 - -
Dere10g0627 390 SUPERFAMILY NAC domain 8 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0627 Dere-ChrDere10 11052565 11054176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0627 6 161 NAC Transcription Factor Family AT5G17260 36.250 4.35e-20 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere10g0627 NAM 6.6e-22 No_clan