Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0623 ATGGGCAATGGCTGCAGTTGTAGGCATCTTTGTAGCCAAGCCTGGAGTGGGGTTCCACGGTTTGAAGCTGGAGCTGATCCTGCTGCCATTGCTCCTTACTCCTTTCTCCTTTGGCCCACTTCTGGGCACCCAATTGCTCCTCATGGGATGGGTAGAGAGCAAGAGATGGGTCGTCTTTTTCAACCCGGATTCCCAGTCAGTGGGGTGGGCCACGCCGGGGTCAAGAACTTCGCCAACTCCATGGGCAACCCGGGCTATCCTGGCGGCAAGTTCTTTGACCCGTTAGGCTTTGCCGGAACAATCAAGGATGGGATTTACATTCCAGATAGGGAGAAGCCAGAGCGGCTAAAAGTGGCTGAGATCAAGCATGCTAGGATTGCAATGTTGGCTATGCTGATTTTCTACTTTGAGGCTGGACACGGGAAGACAACCCTTGGTGCACTTGGCTTGTAA 453 0.5342 MGNGCSCRHLCSQAWSGVPRFEAGADPAAIAPYSFLLWPTSGHPIAPHGMGREQEMGRLFQPGFPVSGVGHAGVKNFANSMGNPGYPGGKFFDPLGFAGTIKDGIYIPDREKPERLKVAEIKHARIAMLAMLIFYFEAGHGKTTLGALGL 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0623 150 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 81 143 IPR001344 GO:0009765|GO:0016020
Dere10g0623 150 Pfam Chlorophyll A-B binding protein 80 138 IPR022796 -
Dere10g0623 150 Gene3D Chlorophyll a/b binding protein domain 10 149 - -
Dere10g0623 150 SUPERFAMILY Chlorophyll a-b binding protein 79 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0623 Dere-ChrDere10 11026134 11026586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0623 10 150 Chloroplast and Mitochondria Gene Families AT1G15820 54.795 1.33e-42 140