Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0617 ATGCGTTGCGTGGCCCGAAACTTGATAATTGTACCTGGTGATTTTGCATCACTGATTGTCATTGCCAAGCTATTTAAGCTGTGTTTGATAGTTATTATAACAGTCAATAAAATGGGAACTGGATGGCAAGTCCCCCCACCCTGTTATTCTCTTGTCTGGTTCATTGCTTTGTCATTTTTCTCTACGTCATGTGCAATGGCAATGCTTCAATATCAGGGTTATTACTGGTCTCTGGCCTTAATGAGTCACCGCATTAGGGATAAGACTGTGGCAACGGCTATGGAGGAAATCAAAAGTGGGCCTCCTTGTCGACATGACAAGACTTTGCCATATATTCACAAGGTGGAAGCTCCTCCTAAGCAAAATCTTCTCACAGAGATCAAAGATGCTGTGAAGGAAACTTTCTTTGCAGACAACCCCTTAGGCCATTTTAAGGACCAACCCAGATCAAGGAAGTTTGTTCTTGGCGCAAAAGCAGTTTTCCCAATTTTTGAATGGGCAAAAGGTTACAATCTTAGCAAATTTAAAGGGGATCTCGTTTCTGGAATTACCATTGCAGGTCTCTTTACTCCTCAGGATATTGCATATGCAAAGCTTGCAAATTTGGAACCCGAATATGGACTGGACTGTGTGAACACCAGCTTTGTGGCCCCTCTTGTATATGCTTTCATGGGAAGCTCAAGAGATATAGTCATAGGACCAGTGGCTGTGAAATCACTTTTGCTTTGGACTTCGCTGACAGATGAGATTGCTGACTACAAAAGTCACGACTATCTTCGTCTTGCATTTACTGCCACTTTTTTCGCAGGAATCACTCAAATGGCACTTGGAGTTCTCAGGCACACCCATGGCACATGGAATTGGGAGACAATAGTCATTGGAGTAGCATTCCTGGTTTTCCTCCTTGCAACCTACCATCTGGTGAAACACATAGATAAGGGAGTGAATCCACCATCTGCTAGTGAAATTTTTTTCACTGAAAAATATCTTGGTGCTGGTATTCGGATTGGTGTGGTAGCTGGTATGGTTGAACTCACGGAAACTGTAGCAATTGGGAGAACATTTGCTGCCTTGAAGAATTATCCATTGGATGGTAACAAAGAAATGGTGGCAATGGGAACAACAAATGTTATTGGTTCACTGACATCTTGTTATATAGCTACAGGATCATTTTCATGCTTAGTAGTTAACTACATGGCTAGCTGTAAGACAACTGTATCAAACATTGTTATATCCATTATCGTGTTATTAACTCTAGTCTTCATAACACCACTGTTTAAGTACACCCCAAATGTTGTTCTTGCTTCCGTTATAATAGCTATTGTAGTAGGCCTTATAGACATTAATGCAGTTGTTCTTCTATAA 1365 0.4117 MRCVARNLIIVPGDFASLIVIAKLFKLCLIVIITVNKMGTGWQVPPPCYSLVWFIALSFFSTSCAMAMLQYQGYYWSLALMSHRIRDKTVATAMEEIKSGPPCRHDKTLPYIHKVEAPPKQNLLTEIKDAVKETFFADNPLGHFKDQPRSRKFVLGAKAVFPIFEWAKGYNLSKFKGDLVSGITIAGLFTPQDIAYAKLANLEPEYGLDCVNTSFVAPLVYAFMGSSRDIVIGPVAVKSLLLWTSLTDEIADYKSHDYLRLAFTATFFAGITQMALGVLRHTHGTWNWETIVIGVAFLVFLLATYHLVKHIDKGVNPPSASEIFFTEKYLGAGIRIGVVAGMVELTETVAIGRTFAALKNYPLDGNKEMVAMGTTNVIGSLTSCYIATGSFSCLVVNYMASCKTTVSNIVISIIVLLTLVFITPLFKYTPNVVLASVIIAIVVGLIDINAVVLL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0617 454 PANTHER SULFATE TRANSPORTER 290 450 IPR001902 GO:0016020|GO:0055085
Dere10g0617 454 Pfam Sulfate permease family 175 280 IPR011547 GO:0016020
Dere10g0617 454 Pfam Sulfate permease family 303 452 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0617 Dere-ChrDere10 10957904 10961482 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0617 78 454 Inorganic Solute Cotransporters AT1G22150 47.335 6.48e-123 370