Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0616 ATGAGTCACCGTGTTAGTGATGAGGTTGTGGCAAGGGCTATGGAGGAAATCAAAAGTGGGCCTCCTTCTAGTCGACATGACAAGACTTTGCCATATATTCACAAGGTGGGAGCTCCTCCTAAGAAAAATCTTCTCACAGAGATCAAAGATACTGTGAAGGAAACTTTCTTCGCTGACAACCCCTTAGGCCATTTTAAGGATCAAACCAGATCAAGAAAGTTTGTTCTTGGCCTACAAGCAGTTTTCCCAATTTTTGAATGGGCAAAAGGTTACAATCTAAACAAATTTAAAGGGGACCTCATTTCTGGAATTACCATTGCAAGTCTCTGTATTCCTCAGGATATTGCATATGCAAGGCTTGCAAATTTGCAACCTGAGTATGGACTATACACCAGCTTTGTGGCTCCTCTTGTATATGCTTTCATGGGCAGTTCAAGAGATATAGCCATAGGACCAGTGGCTGTGGTATCCCTTCTGCTTGGAACTTCGCTGACTGATGAGATTGGTGACTACAAAAGCCACGACTATCTTCGTCTTGCATTTACTGCCACCTTTTTTGCAGGAATTACTCAGATGGCCCTTGGAGTTTTCAGGCTTGGTTTTTTAATTGACTTCTTATCTCATGCTGCCATTGTGGGATTCATGGCTGGAGCTGCCATTACTATAGCGCTGCAGCAGCTTAAAGGTTTGCTTGGCATAAAAGACTTTACCAAGAAGACTGATATTGTTTCTGTCATGCGCTCAGTTTGGACTAATGTGCATCACGGGTGGAATTGGGAGACAATAGTCATTGGAGTAGCATTCTTGGCTTTCCTCCTTGCAACTAAGTATCTGGCAAAGAAAAAGAAGAAACTCTTTTGGGTGTCTGCACTTGCTCCTTTGGTTTCTGTTATATTGTCCACCTTTTTTGTATACATTACCCGAGCTGACAAGAAAGGTGTTGCAATTGTGAGACACATAAATCAGGGAGTGAATCCACCATCTGCTAGTGAAATTTTTTTCAGTGGAAAATATCTTGGCCCTGGTATACGCATTGGTGTGATAGCTGGTATGGTTGCACTGACGGAAGCTGTAGCAATTGGGAGAACATTTGCTGCCTTGAAGGATTATCCATTGGATGGTAACAAAGAAATGGTGGCAATGGGAACAATGAATGTTATTGGTTCACTGACATCTTGTTATGTAGCTACAGGATCTTTTTCGCGCTCAGCAGTGAACTTCATGGCTGGTTGTAATACTGCTGTATCAAACATTGTTATGTCCATTATTGTGTTATTAACTATGGTGTTCATTACACCACTGTTTAAGTACACCCCAAACGCTGTGCTTGCTTCCATTATAATAGCTGCTGTGCTAGGCCTTATCGACATTGATGCAACTGTTCTGCTATGGAAGATTGACAAATTTGATTTTGTAGCCTGCATGGGAGCCTTCCTCGGTGTGATTTTCAAAAATGTTGAGATTGGCCTTCTAATCGCGGTGGCCATATCATTTGCCAAAATCCTTTTACAAGTGACAAGGCCCAGGACTGTAGTACTTGGGAAGCTTCCAGGGACCACTGTGTACAGGAACATCCAGCAATACCCGAATGCTACACAGATTCCCAGCATGTTGATTATAAGAGTTGACTCTGCTATCTACTTCTCAAACTCCAACTATATCAAGGACAGAATTCTGAGATGGCTGCAAGATGAAGATGCACAAAGGAAAGAAAGTAGTTTTCCCATGATACAATTTCTCGTCGTCGAAATGTCACCTGTTACTGACATTGATACTAGTGGCATCCATGCCTTTGAAGAGTTACATAAGAGCCTTCAGAAAAGAGAGGTTCAGCTAATCTTGGCAAATCCTGGGCCAATTGTAATGGAGAAGCTTCATACATCCAAATTAGTAGACATAATTGGGGAAGACAAGATATTTCTATCAGTGCGTGATGCTGTTGCAACTTTTGGTTCAAAGGCTGAAGAAGTTTGA 1974 0.42 MSHRVSDEVVARAMEEIKSGPPSSRHDKTLPYIHKVGAPPKKNLLTEIKDTVKETFFADNPLGHFKDQTRSRKFVLGLQAVFPIFEWAKGYNLNKFKGDLISGITIASLCIPQDIAYARLANLQPEYGLYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTSLTDEIGDYKSHDYLRLAFTATFFAGITQMALGVFRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGLLGIKDFTKKTDIVSVMRSVWTNVHHGWNWETIVIGVAFLAFLLATKYLAKKKKKLFWVSALAPLVSVILSTFFVYITRADKKGVAIVRHINQGVNPPSASEIFFSGKYLGPGIRIGVIAGMVALTEAVAIGRTFAALKDYPLDGNKEMVAMGTMNVIGSLTSCYVATGSFSRSAVNFMAGCNTAVSNIVMSIIVLLTMVFITPLFKYTPNAVLASIIIAAVLGLIDIDATVLLWKIDKFDFVACMGAFLGVIFKNVEIGLLIAVAISFAKILLQVTRPRTVVLGKLPGTTVYRNIQQYPNATQIPSMLIIRVDSAIYFSNSNYIKDRILRWLQDEDAQRKESSFPMIQFLVVEMSPVTDIDTSGIHAFEELHKSLQKREVQLILANPGPIVMEKLHTSKLVDIIGEDKIFLSVRDAVATFGSKAEEV 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0616 657 Gene3D STAS domain 507 653 IPR036513 -
Dere10g0616 657 FunFam Sulfate transporter 31 507 653 - -
Dere10g0616 657 NCBIfam sulfate permease 83 646 IPR001902 GO:0016020|GO:0055085
Dere10g0616 657 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
Dere10g0616 657 PANTHER SULFATE TRANSPORTER 45 649 IPR001902 GO:0016020|GO:0055085
Dere10g0616 657 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Dere10g0616 657 Pfam STAS domain 528 646 IPR002645 -
Dere10g0616 657 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Dere10g0616 657 Pfam Sulfate permease family 96 475 IPR011547 GO:0016020
Dere10g0616 657 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0616 Dere-ChrDere10 10951004 10955057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0616 2 657 Inorganic Solute Cotransporters AT1G22150 68.845 0.0 903