Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0610 ATGAAGGGAGTGATTTCGTCTTTGATGGGCTCGTTTCTTCTTTGGGCGATTTTAGTGTTTGATTTGGTGCTAAAGGTTTCTGGCAATGCGGAAGGTGATGCCCTGAATGCATTGAAGAATAACATGGCTGATCCCAACAATGTTCTTCAAAGTTGGGATCCTACCCTTGTGAATCCCTGCACGTGGTTTCATGTTACATGCAATAGTGATAATAGTGTGACCCGTGTTGATCTTGGAAATGCAAACCTTTCGGGTCAACTGGTTTCGCAGCTTGGTCAGCTCCCAAATTTGCAGTACTTGGAACTTTATAGTAACACTATAAGTGGAAAAATCCCAGAGGAGCTTGGAAACTTAACAAGCTTGGTGAGCTTGGATCTTTACTTGAACAACTTAACTGGTCCCATCCCAGCCACATTGGGCAAGCTTAACAAACTACGTTTCCTGCGTCTCAATAATAACACCTTGTCTGGAAACATTCCTATGTCTTTGACTAATGTAACTTCACTGCAAGTCCTTGATCTCTCAAACAACAATTTGGAAGGAGATACTCCAGTCAATGGTTCATTTTCATTGTTTACTCCCATCAGTTTTCAAAATAATCCTAAATTGAAAGCACAAAAGGTCTCTCCACCTCCTCCAACTTCTCCAATGCCACCAGCTCGTTCAGGTAACAGTGATACTGCGGCTATTGCTGGAGGAGTTGCTGCTGGTGCTGCTCTGTTGTTTGCAGCCCCTGCAATTGCCCTTGCATATTGGCGAAGAAGGAAACCACAGGAATATTTCTTTGATGTTCCTGCTGAGGAGGATCCTGAGGTTCACCTTGGTCAGCTTAAACGTTTTTCACTGCGTGAGCTGCAAGTTGCAACAGATCACTTTAGTAACAAAAACATTCTGGGCAAAGGTGGTTTTGGGAAGGTTTATAAAGGACGCTTAGCTGATGGTTCTCTAGTAGCAGTAAAAAGACTTAAAGAAGAACGCACTCAGGGTGGGGAGCTGCAGTTTCAAACAGAAGTGGAAATGATTAGCTTAGCTGTGCATCGGAATTTGCTTCGGCTGCGTGGTTTTTGCATGACGCCAACTGAACGGTTGCTTGTGTATCCTTTCATGGTTAATGGAAGTGTTGCATCATGTTTACGAGAGCGTCCCGAATCACAACCCCCACTTGACTGGCCAATACGGAAGCGTATTGCATTGGGAGCTGCTAGGGGACTTGCTTATCTGCATGATCATTGTGACCCGAAGATCATTCATCGTGATGTCAAAGCAGCCAATATATTGCTGGATGAGGAATTTGAAGCAGTTGTGGGAGATTTTGGTTTAGCAAAACTCATGGATTACAAAGATACTCATGTTACCACTGCCGTGCGTGGTACGATTGGGCATATAGCACCAGAATACCTCTCTACTGGAAAGTCTTCAGAGAAGACTGATGTTTTTGGATATGGTGTTATGCTTCTCGAATTAATAACTGGGCAAAGGGCTTTTGATCTTGCACGACTTGCCAACGATGATGATGTCATGTTGCTTGATTGGGTGAAAGGACTTCTGAAGGACAAGAGGTTGGAAACACTGGTTGATGCTGATTTACGGGGAAATTATAATGAAGAGGAGGTAGAGCAGCTAATCCAAGTAGCCTTACTATGCACACAAGGCACCCCTTTGGAAAGACCCAGAATGTCAGAGGTGGTCAGAATGCTTGAAGGTGATGGTTTGGCAGAGAAGTGGGAGCAGTGGCAAAGAGAAGAGATGTTCCGGCAAGATTTCAATTACACTCATCACGCCAATGCTAATTGGATAGTAGACTCAACTTCACATATCCCACCAGATGAACTATCAGGTCCTCGATGA 1848 0.441 MKGVISSLMGSFLLWAILVFDLVLKVSGNAEGDALNALKNNMADPNNVLQSWDPTLVNPCTWFHVTCNSDNSVTRVDLGNANLSGQLVSQLGQLPNLQYLELYSNTISGKIPEELGNLTSLVSLDLYLNNLTGPIPATLGKLNKLRFLRLNNNTLSGNIPMSLTNVTSLQVLDLSNNNLEGDTPVNGSFSLFTPISFQNNPKLKAQKVSPPPPTSPMPPARSGNSDTAAIAGGVAAGAALLFAAPAIALAYWRRRKPQEYFFDVPAEEDPEVHLGQLKRFSLRELQVATDHFSNKNILGKGGFGKVYKGRLADGSLVAVKRLKEERTQGGELQFQTEVEMISLAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERPESQPPLDWPIRKRIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKRLETLVDADLRGNYNEEEVEQLIQVALLCTQGTPLERPRMSEVVRMLEGDGLAEKWEQWQREEMFRQDFNYTHHANANWIVDSTSHIPPDELSGPR 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0610 615 Gene3D Phosphorylase Kinase; domain 1 261 368 - -
Dere10g0610 615 MobiDBLite consensus disorder prediction 202 224 - -
Dere10g0610 615 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Dere10g0610 615 SUPERFAMILY Protein kinase-like (PK-like) 271 567 IPR011009 -
Dere10g0610 615 Pfam Protein tyrosine and serine/threonine kinase 295 566 IPR001245 GO:0004672|GO:0006468
Dere10g0610 615 SUPERFAMILY L domain-like 31 195 - -
Dere10g0610 615 FunFam Somatic embryogenesis receptor kinase 1 27 214 - -
Dere10g0610 615 Gene3D Ribonuclease Inhibitor 28 211 IPR032675 -
Dere10g0610 615 ProSiteProfiles Protein kinase domain profile. 292 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0610 615 Gene3D Transferase(Phosphotransferase) domain 1 369 586 - -
Dere10g0610 615 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 577 - -
Dere10g0610 615 FunFam Somatic embryogenesis receptor kinase 1 261 368 - -
Dere10g0610 615 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Dere10g0610 615 SMART serkin_6 292 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0610 615 Pfam Leucine Rich Repeat 168 183 IPR001611 GO:0005515
Dere10g0610 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Dere10g0610 615 FunFam Somatic embryogenesis receptor-like kinase 1 369 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0610 Dere-ChrDere10 10832184 10842873 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0610 8 615 Receptor kinase-like Gene Family AT4G33430 77.812 0.0 989
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Dere10g0610 Pkinase 4.2e-43 CL0016