Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0596 ATGGGAGATTCAGATCATCACAGCAATGTCAATCTTCCTCCTGGGTTTCGCTTTTACCCCACAGACGAAGAGCTCGTTGTCCATTTCCTTCACAGAAAGGCTTCCCTCTTGCCTTGCCACCCAGATGTCATCCCCGATCTTGACATCTTCCCTTATGATCCTTGGGAGCTTCATGGAAAAGCTTTGGCTGAGGGAAACCAATGGTACTACTACAGCAGAAGGACACAAAATAGGGTCACCAATAATGGGTATTGGAAGCCAATGGGAATAGAGGAGCCAATCATTACAAGCTCAGGCAATAAAAGTGTTGGAGTGAAGAAATACTTCATCTTCTTTCTGGGAGAAGCACCAGCTGGTATCAAAACCAACTGGATCATGCAGGAGTATCGTCTCTCAGATTCTGCTTCTTCATCTTCTTCTTCTAGCAGATCATCAAAGAGAAAATCACAGCCAAGAACAGATTACTGTAAATGGGTGATTTGTCGAGTTTATGAGCACGATAGTGATAATGACGACGGTGGTGATGATGATGGAGGAACAGAGCTCTCTTGTTTGGATGAAGTTTTCTTGTCACTGGATGATCTTGACGAGATTAGCCTGCCAAATTAG 609 0.4417 MGDSDHHSNVNLPPGFRFYPTDEELVVHFLHRKASLLPCHPDVIPDLDIFPYDPWELHGKALAEGNQWYYYSRRTQNRVTNNGYWKPMGIEEPIITSSGNKSVGVKKYFIFFLGEAPAGIKTNWIMQEYRLSDSASSSSSSSRSSKRKSQPRTDYCKWVICRVYEHDSDNDDGGDDDGGTELSCLDEVFLSLDDLDEISLPN 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0596 202 ProSiteProfiles NAC domain profile. 12 166 IPR003441 GO:0003677|GO:0006355
Dere10g0596 202 Gene3D NAC domain 21 170 IPR036093 GO:0003677|GO:0006355
Dere10g0596 202 PANTHER NAC TRANSCRIPTION FACTOR 56 12 170 - -
Dere10g0596 202 FunFam NAC domain-containing protein 104 21 169 - -
Dere10g0596 202 SUPERFAMILY NAC domain 9 164 IPR036093 GO:0003677|GO:0006355
Dere10g0596 202 Pfam No apical meristem (NAM) protein 13 131 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0596 Dere-ChrDere10 10692163 10693433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0596 1 168 NAC Transcription Factor Family AT1G61110 44.134 3.21e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere10g0596 NAM 3.1e-27 No_clan