Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0594 ATGACAGCTATAGCTGGTTCTATCTTTGAAGCTGTAGGGGAAGAAGAGAAGAGACATCTGAGAAGTTCTATTGAGCTTTTAAGACAGTTTTCCGGTTCTTTCACTTCGGGTGGGTTGGGCCAATTCCATAAGGAATGCCTCACGGGTTTTGGACAAGGTTTAAGGAGGGAAACACGAAAGCGGCGCAGAGCTCAGGGTCTTCAATTTGTGATAGCCATCATGGTGAACGTTCCAAAGACGAAGAAGACTTACTGCAAGAGTAAGGAATGCAGGAAGCACACCTTACACAAGGTCACACAATACAAGAAGGGTAAGGATAGCCTTGCAGCTCAGGGAAAGCGCCGTTATGACCGTAAGCAGTCAGGTTATGGTGGACAGACAAAGCCTGTGTTCCACAAGAAGGCTAAAACCACCAAAAAGATTGTCTTGAGGCTGCAATGCCAAGGTTGCAAACATGTATCCCAGCATCCTATTAAGAGGTGCAAGCACTTTGAGATTGGAGGGGATAAGAAGGGAAAGGGAACTTCTCTGTTCTAA 537 0.46 MTAIAGSIFEAVGEEEKRHLRSSIELLRQFSGSFTSGGLGQFHKECLTGFGQGLRRETRKRRRAQGLQFVIAIMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0594 178 MobiDBLite consensus disorder prediction 102 130 - -
Dere10g0594 178 SUPERFAMILY Zn-binding ribosomal proteins 75 167 IPR011332 GO:0006412
Dere10g0594 178 PANTHER 60S RIBOSOMAL PROTEIN L36A/L44 74 178 IPR000552 GO:0003735|GO:0005840|GO:0006412
Dere10g0594 178 Gene3D - 74 178 - -
Dere10g0594 178 ProSitePatterns Ribosomal protein L44e signature. 136 147 IPR000552 GO:0003735|GO:0005840|GO:0006412
Dere10g0594 178 FunFam 60S ribosomal protein L44 74 178 - -
Dere10g0594 178 Pfam Ribosomal protein L44 92 167 IPR000552 GO:0003735|GO:0005840|GO:0006412
Dere10g0594 178 MobiDBLite consensus disorder prediction 102 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0594 Dere-ChrDere10 10625366 10628666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0594 74 178 Cytoplasmic Ribosomal Protein Gene Family AT3G23390 93.333 2.34e-68 201