Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0580 ATGGCTTCTTATCAGAACAATGAAATGCCACTCAACCATATTGAGATTCCCATTCATCATAATGAAGTGGTGAATCCAAAGCCCAATATCCAAGACACTGAAGAAAACAGCATCAACTTCTCTCAAAGGGCACAACTGCTTAGAGCAGCAGTGTTGGGAGCCAATGATGGGTTGGTCACTGTGACCTCTCTCATGATGGGTGTTGGTGCTGTTAGGGAAGACAACAGGGCCATGCTTCTCGCGGGCTTTGCCGGCCTAGTCGCCGGAGCTTGCAGTATGGCCATTGGGGAGTTTGTGTCAGTGTACACTCAGCTAGACATAGAGTTAGCTCAGATGAAGAGAGAAAGGGAAGCTAGCAACAATGGAGGGAAAGAACTTGAGGATGGTGAAAAGGACAAGCTTCCAAACCCACTTCAAGCTGCCACAGCATCAGCACTTGCATTTTCTGTTGGTGCTGTGGTGCCTCTGCTAGGAGCTGTGTTCATAAGAGATTATAGAGTCAGGACGGCTGTTGTTGCTGCTCTGGCTAGCTTGGCATTGCTAGTTTTTGGAGGGGTAGGAGCAGTGCTTGGTAAAACTTCAGTGAGTAGATCTTGTGTTAGGGTTCTCATTGGAGGTTGGATGGCCATGGCTATCACTTTTGGCCTAACCAAGTTGATTGGCTTCACTGGACTTTGA 678 0.4779 MASYQNNEMPLNHIEIPIHHNEVVNPKPNIQDTEENSINFSQRAQLLRAAVLGANDGLVTVTSLMMGVGAVREDNRAMLLAGFAGLVAGACSMAIGEFVSVYTQLDIELAQMKREREASNNGGKELEDGEKDKLPNPLQAATASALAFSVGAVVPLLGAVFIRDYRVRTAVVAALASLALLVFGGVGAVLGKTSVSRSCVRVLIGGWMAMAITFGLTKLIGFTGL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0580 225 CDD Nodulin-21 45 194 - -
Dere10g0580 225 Pfam VIT family 47 122 IPR008217 GO:0005384|GO:0030026
Dere10g0580 225 Pfam VIT family 131 217 IPR008217 GO:0005384|GO:0030026
Dere10g0580 225 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 28 220 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0580 Dere-ChrDere10 10416834 10417511 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0580 25 225 Nodulin-like Gene Family AT3G43660 62.189 6.90e-86 251