Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0579 ATGGCTGCCCTTGTGCCCTGTGGTTTGGCATCCCTCAAAGATGTACGCGTAGTCTCATGCGAAGAGAATGAAGAGGATCAGAAGCAAATACAAGTTCCTAAGGACGAAGATGAAGATTTCGACTATTCTGAAAGGGCACAATGGCTTCGAGCCGCTGTACTGGGAGCCAATGATGGGTTGGTTTCAATTGCAGCATTGATGATGGGTGTAGGAGCAGTGAAAACAGATGTGAAAGCCATGCTTCTTGCTGGTTTTGCAGGGACAGTTGCAGGAGCTTGCAGTATGGCTATAGGAGAGTTTGTATCTGTGTATACTCAGTATGAAGTTGAAGTTGCCCAAATGAAGAGAAATATGATCTGTAAAAATGATGAAGAAGACATGGAGATGCAGATGGAGAAGAAGAAGCATACACTGCCTAATCCATTTCAGGCAGCTTTTGCTTCTGCAGTGTCATTCAGCATAGGAGCAGTGGTTCCATTGCTTGCGGCTGCATTGATAACAGACTACAACATAAGGCTAATGGTGCTTGTGGGTGTGGCTACTTTGGCTTTAATAGTGTTTGGATTGGTGGGATCTGTGTTGGGAAAAACTCCTATTGTGAGATGTTGTGTGAGGGTTGTGTGCGGAGGATGGATAGCTATGGCTCTCACTTTTGGATTAACCAAGTTACTGGGTTCCAGTGGATTGCAGCTATGA 696 0.4511 MAALVPCGLASLKDVRVVSCEENEEDQKQIQVPKDEDEDFDYSERAQWLRAAVLGANDGLVSIAALMMGVGAVKTDVKAMLLAGFAGTVAGACSMAIGEFVSVYTQYEVEVAQMKRNMICKNDEEDMEMQMEKKKHTLPNPFQAAFASAVSFSIGAVVPLLAAALITDYNIRLMVLVGVATLALIVFGLVGSVLGKTPIVRCCVRVVCGGWIAMALTFGLTKLLGSSGLQL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0579 231 CDD Nodulin-21 47 198 - -
Dere10g0579 231 Pfam VIT family 120 221 IPR008217 GO:0005384|GO:0030026
Dere10g0579 231 Pfam VIT family 49 127 IPR008217 GO:0005384|GO:0030026
Dere10g0579 231 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 22 224 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0579 Dere-ChrDere10 10409959 10410654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0579 22 229 Nodulin-like Gene Family AT3G43660 60.577 4.70e-90 262