Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0568 ATGTCTAGGGTTGGGTCTTCGCTATTCCGCCTGTTGATTTCAATCTTCCTGATCCCTCATGAAGTTTCCAGCTCCTACGCTGGTTCTGCTAGTGCCATCATCAACCCTTCAAAAGTCAAACAAGTTTCATGGAAGCCAAGAGCTTTCGTTTATGAAGGTTTCCTCACAGACTTGGAATGTGACCACTTGATCTCTATAGCCAAATCAAAGTTGAAGAGATCTATAGAGAGGAAGGAGCATCAAATTATCTTGGAAAAGAAGTTGGCTAATGTTGATGTCTTAGAGGAAGATCAAAACAACCTGCTTAAGTTTCTAGAGAAAAAGGAAACAGAATATATGCACCTTCAAAGGCATAAGATGGGTGTTGATGATTTTGAGTTATTAACTATGATTGGAAAAGGTGCATTTGGAGAGGTCAGAGTCTATAGGGAAAAGACAACAGGCCATATATATGCAATGAAAAAGCTAAAGAAGTTAGAGATGCTTCGTAGAGGCCAGGTAGAACATGTCAGAGCTGAAAGAAACCTCCTCGCAGAGGTTGACAACAATTGCATAGTCAAACTATACTGTTCTTTCCAGGATAATGAGTATTTGTATCTTATTATGGAGTATCTACCTGGTAGAGATATGATGACCCTTCTTATGAGAAAAGATACCTTGACTGAAGATGAAGCTAGATTTTATGTTGGAGAAACAGTTTTGGCTATTGAATCTATACATAAACACAATTATTTCCATCGGGATATCAAGCCTGAAAATTTGCTACTTAATAGATATGGACACTTGAGACTTACACAGAAAGATGGTTACTAA 813 0.3813 MSRVGSSLFRLLISIFLIPHEVSSSYAGSASAIINPSKVKQVSWKPRAFVYEGFLTDLECDHLISIAKSKLKRSIERKEHQIILEKKLANVDVLEEDQNNLLKFLEKKETEYMHLQRHKMGVDDFELLTMIGKGAFGEVRVYREKTTGHIYAMKKLKKLEMLRRGQVEHVRAERNLLAEVDNNCIVKLYCSFQDNEYLYLIMEYLPGRDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYFHRDIKPENLLLNRYGHLRLTQKDGY 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0568 270 SUPERFAMILY Protein kinase-like (PK-like) 107 265 IPR011009 -
Dere10g0568 270 FunFam Non-specific serine/threonine protein kinase 209 268 - -
Dere10g0568 270 PANTHER SERINE/THREONINE-PROTEIN KINASE 73 265 - -
Dere10g0568 270 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Dere10g0568 270 ProSitePatterns Protein kinases ATP-binding region signature. 131 154 IPR017441 GO:0005524
Dere10g0568 270 Gene3D Transferase(Phosphotransferase) domain 1 209 265 - -
Dere10g0568 270 Gene3D Phosphorylase Kinase; domain 1 97 208 - -
Dere10g0568 270 ProSiteProfiles Protein kinase domain profile. 125 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0568 270 SMART serkin_6 125 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0568 270 FunFam Non-specific serine/threonine protein kinase 96 208 - -
Dere10g0568 270 Pfam Protein kinase domain 126 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0568 Dere-ChrDere10 10252807 10253776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0568 68 265 AGC Kinase Gene Family AT1G03920 81.818 1.31e-114 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Dere10g0568 Pkinase 8.9e-35 CL0016